RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 IFITM2Q01629 132 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OC90Q02509 493 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SPOCK1Q08629 439 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RIPPLY1Q0D2K3 151 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR1C1Q15619 314 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF260Q3ZCT1 412 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM255AQ5JRV8 349 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 WIPI1Q5MNZ9 446 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 METTL11BQ5VVY1 283 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SPINK14Q6IE38 97 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 DRAM2Q6UX65 266 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF627Q7L945 461 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 LUZP2Q86TE4 346 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SULF2Q8IWU5 870 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR5AS1Q8N127 324 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM229BQ8NBD8 167 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CLEC1AQ8NC01 280 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MDS2Q8NDY4 140 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR52N4Q8NGI2 321 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR4D6Q8NGJ1 314 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR52H1Q8NGJ2 320 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR51E1Q8TCB6 317 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 AQP3Q92482 292 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 HAS2Q92819 552 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 PHF21AQ96BD5 680 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SEH1LQ96EE3 360 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 FBXO17Q96EF6 278 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 HYLS1Q96M11 299 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SFXN2Q96NB2 322 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 SIGLEC12Q96PQ1 595 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 FYTTD1Q96QD9 318 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RBM24Q9BX46 236 aaKnown RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ULBP2Q9BZM5 246 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ATG5Q9H1Y0 275 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MED28Q9H204 178 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 OR51J1Q9H342 316 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 GSX1Q9H4S2 264 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 RANBP3Q9H6Z4 567 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF703Q9H7S9 590 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 CNTD2Q9H8S5 307 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MYOZ1Q9NP98 299 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 GPR84Q9NQS5 396 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM38BQ9NVV0 291 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 MCUBQ9NWR8 336 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 B4GALT7Q9UBV7 327 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ATPIF1Q9UII2 106 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF391Q9UJN7 358 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 POLR1DQ9Y2S0 133 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 KLF13Q9Y2Y9 288 aaPredicted RBP5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 NPTNQ9Y639 398 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 U3KQE9 123 aa5.27□□□□□ -1.57
VIPAS39-204ENST00000553576 WDFY4Q6ZS81 3184 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TRAV6A0A075B6T7 132 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 IGHV3-15A0A0B4J1V0 119 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 OR6C6A6NF89 314 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 KLRC4-KLRK1H3BQV0 150 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CXCL13O43927 109 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 NME2P1O60361 137 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 EIF4EBP3O60516 100 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 MTRF1O75570 445 aaKnown RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TRAPPC6AO75865 159 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 DHRS3O75911 302 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ACTL6AO96019 429 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CD74P04233 296 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 LPLP06858 475 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SP1P08047 785 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 AKAIN1P0CW23 69 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 NAT2P11245 290 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF708P17019 499 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 POU3F2P20265 443 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 NME2P22392 152 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 STOMP27105 288 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF93P35789 620 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GNALP38405 381 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 STARP49675 285 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 RRADP55042 308 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CLDN18P56856 261 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 TAS2R19P59542 299 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ACTBP60709 375 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 PCBD1P61457 104 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ACTG1P63261 375 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CD83Q01151 205 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SCRN3Q0VDG4 424 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 PMPCAQ10713 525 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 FAPQ12884 760 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 CDK10Q15131 360 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 RAB35Q15286 201 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 FCN2Q15485 313 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 NDUFA5Q16718 116 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 PCGF3Q3KNV8 242 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SFRP4Q6FHJ7 346 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GLDNQ6ZMI3 551 aaPredicted RBP5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 AAED1Q7RTV5 226 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC36A1Q7Z2H8 476 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ANGPTL5Q86XS5 388 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF100Q8IYN0 542 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 GALNT16Q8N428 558 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM109AQ8N4B1 249 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM89BQ8N5H3 189 aa5.26□□□□□ -1.57
VIPAS39-204ENST00000553576 SPICQ8N5J4 248 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms