RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SLC3A1Q07837 685 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 BCL2L15Q5TBC7 163 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ZNF420Q8TAQ5 688 aaPredicted RBP19.28■□□□□ 0.68
TDP1-206ENST00000553569 PPP1R14AQ96A00 147 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ADI1Q9BV57 179 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 GCM1Q9NP62 436 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 TMEM106BQ9NUM4 274 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 NUFIP1Q9UHK0 495 aaKnown RBP19.28■□□□□ 0.68
TDP1-206ENST00000553569 WIPI2Q9Y4P8 454 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ABCA1O95477 2261 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 DAPL1A0PJW8 107 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 CD5LO43866 347 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 ZNF16P17020 682 aaPredicted RBP19.27■□□□□ 0.68
TDP1-206ENST00000553569 MMP16P51512 607 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 ADARB1P78563 741 aaKnown RBP19.27■□□□□ 0.68
TDP1-206ENST00000553569 OR8B8Q15620 311 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 TP53I3Q53FA7 332 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 PRAMEF6Q5VXH4 476 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 ZNF771Q7L3S4 317 aaPredicted RBP19.27■□□□□ 0.68
TDP1-206ENST00000553569 FAM220AQ7Z4H9 259 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 MOGAT3Q86VF5 341 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 CLDND2Q8NHS1 167 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 CNIH3Q8TBE1 160 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 OR51E1Q8TCB6 317 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 RAB1CQ92928 201 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 FAM71F1Q96KD3 344 aaPredicted RBP19.27■□□□□ 0.68
TDP1-206ENST00000553569 SIGLEC11Q96RL6 698 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 PAPOLGQ9BWT3 736 aaKnown RBP19.27■□□□□ 0.68
TDP1-206ENST00000553569 MOB1AQ9H8S9 216 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 ZNF391Q9UJN7 358 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 GNG8Q9UK08 70 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 OR52A1Q9UKL2 312 aa19.27■□□□□ 0.68
TDP1-206ENST00000553569 A0A0U1RQV5 110 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 ISPDA4D126 451 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 GMDSO60547 372 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 ACKR3P25106 362 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 GNALP38405 381 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 CAPGP40121 348 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 CD200P41217 278 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 MAB21L1Q13394 359 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 SMN1Q16637 294 aaKnown RBP19.26■□□□□ 0.67
TDP1-206ENST00000553569 ZNF684Q5T5D7 378 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 LIPNQ5VXI9 398 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 PEG10Q86TG7 708 aaKnown RBP19.26■□□□□ 0.67
TDP1-206ENST00000553569 SETD9Q8NE22 299 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 CSNK2A3Q8NEV1 391 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 G6PC2Q9NQR9 355 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 GPR84Q9NQS5 396 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 UFSP2Q9NUQ7 469 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 EXOGQ9Y2C4 368 aaKnown RBP19.26■□□□□ 0.67
TDP1-206ENST00000553569 RHBDD3Q9Y3P4 386 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 PCDHGB1Q9Y5G3 927 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 SNX5Q9Y5X3 404 aa19.26■□□□□ 0.67
TDP1-206ENST00000553569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.25■□□□□ 0.67
TDP1-206ENST00000553569 J3QRE1 110 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 WBP4O75554 376 aaKnown RBP19.25■□□□□ 0.67
TDP1-206ENST00000553569 SULT1C4O75897 302 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 TTRP02766 147 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 GZMKP49863 264 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 CYB5R2Q6BCY4 276 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 ACBD7Q8N6N7 88 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 OR8S1Q8NH09 359 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 NRG4Q8WWG1 115 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 PPP1R3EQ9H7J1 279 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 YAE1D1Q9NRH1 226 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 ACOXLQ9NUZ1 547 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 SLC22A13Q9Y226 551 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 RPL36Q9Y3U8 105 aaKnown RBP19.25■□□□□ 0.67
TDP1-206ENST00000553569 ZANQ9Y493 2812 aa19.25■□□□□ 0.67
TDP1-206ENST00000553569 MTORP42345 2549 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 TLN2Q9Y4G6 2542 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 CYB5R3P00387 301 aaPredicted RBP19.24■□□□□ 0.67
TDP1-206ENST00000553569 PSMB10P40306 273 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 SNCBQ16143 134 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 ODF4Q2M2E3 257 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 ELMOD2Q8IZ81 293 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 FTMTQ8N4E7 242 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 CELF2-AS1Q8N7Q2 184 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 RORBQ92753 470 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 HPS1Q92902 700 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 NPTNQ9Y639 398 aa19.24■□□□□ 0.67
TDP1-206ENST00000553569 FADS2O95864 444 aaKnown RBP19.23■□□□□ 0.67
TDP1-206ENST00000553569 GNAO1P09471 354 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 IL18R1Q13478 541 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 MPPED2Q15777 294 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 CDONQ4KMG0 1287 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 C6orf52Q5T4I8 152 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 CATSPERDQ86XM0 798 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 KLBQ86Z14 1044 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 SPERTQ8NA61 448 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 OR52I1Q8NGK6 324 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 PIGCQ92535 297 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 MSI2Q96DH6 328 aaKnown RBP19.23■□□□□ 0.67
TDP1-206ENST00000553569 GAL3ST1Q99999 423 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 MYRFQ9Y2G1 1151 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 ABCA2Q9BZC7 2435 aa19.23■□□□□ 0.67
TDP1-206ENST00000553569 LOC100289279A0A1B0GTE1 492 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 ZNF850A8MQ14 1090 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 H0YAE9 185 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 TMEM178BH3BS89 294 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms