RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FSHBP01225 129 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 LHBP01229 141 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 OR8G1Q15617 311 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 TUSC1Q2TAM9 212 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF404Q494X3 552 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 LCN1P1Q5VSP4 162 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 SPICQ8N5J4 248 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 IL4I1Q96RQ9 567 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 TMEM246Q9BRR3 403 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 PRRG3Q9BZD7 231 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 OR10A2Q9H208 303 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-227ENST00000553256 LAMP5Q9UJQ1 280 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 N6AMT1Q9Y5N5 214 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 ISPDA4D126 451 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 ACOD1A6NK06 481 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 SLC22A31A6NKX4 558 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 TBX1O43435 398 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF205O95201 554 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 PNPP00491 289 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 PCMT1P22061 227 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 CPT2P23786 658 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF684Q5T5D7 378 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF679Q8IYX0 411 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 SPERTQ8NA61 448 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 UBE2FQ969M7 185 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 ITPKCQ96DU7 683 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 CNN2Q99439 309 aaKnown RBP16.13■□□□□ 0.17
PTCH1-227ENST00000553256 TLNRD1Q9H1K6 362 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 MMP26Q9NRE1 261 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 UBAP1Q9NZ09 502 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 NOP16Q9Y3C1 178 aaKnown RBP16.13■□□□□ 0.17
PTCH1-227ENST00000553256 RHBDD3Q9Y3P4 386 aa16.13■□□□□ 0.17
PTCH1-227ENST00000553256 A0A0U1RQV5 110 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 PSMD9O00233 223 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 EI24O14681 340 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF254O75437 659 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 IFNA2P01563 188 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 HNF1AP20823 631 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 CFL1P23528 166 aaKnown RBP16.12■□□□□ 0.17
PTCH1-227ENST00000553256 HTR1FP30939 366 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 PSMB10P40306 273 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 TIGD6Q17RP2 521 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 SLC25A30Q5SVS4 291 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF841Q6ZN19 808 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 Q6ZSR3 168 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 MUC20Q8N307 709 aaPredicted RBP16.12■□□□□ 0.17
PTCH1-227ENST00000553256 DEFB108BQ8NET1 73 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 OR8J1Q8NGP2 316 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 ASB17Q8WXJ9 295 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 RNF166Q96A37 237 aaPredicted RBP16.12■□□□□ 0.17
PTCH1-227ENST00000553256 EME1Q96AY2 570 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 PGAM5Q96HS1 289 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 HRASLS5Q96KN8 279 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 BRD7Q9NPI1 651 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 CLN6Q9NWW5 311 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 MRM2Q9UI43 246 aaKnown RBP16.12■□□□□ 0.17
PTCH1-227ENST00000553256 TMEM14AQ9Y6G1 99 aa16.12■□□□□ 0.17
PTCH1-227ENST00000553256 J3QLI3 93 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 FCN3O75636 299 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 CST4P01036 141 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 ALDH3A2P51648 485 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 LCN2P80188 198 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 MFGE8Q08431 387 aaPredicted RBP16.11■□□□□ 0.17
PTCH1-227ENST00000553256 FAM76BQ5HYJ3 339 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 KCTD18Q6PI47 426 aaPredicted RBP16.11■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF771Q7L3S4 317 aaPredicted RBP16.11■□□□□ 0.17
PTCH1-227ENST00000553256 SSX6Q7RTT6 188 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 KRT77Q7Z794 578 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.11■□□□□ 0.17
PTCH1-227ENST00000553256 GID4Q8IVV7 300 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 SLC35F2Q8IXU6 374 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 KLHL36Q8N4N3 616 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 GCSAMQ8N6F7 178 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 PPP1R14AQ96A00 147 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 MBOAT4Q96T53 435 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 MNTQ99583 582 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 SLC29A1Q99808 456 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 RIBC2Q9H4K1 309 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 UFSP2Q9NUQ7 469 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 WARS2Q9UGM6 360 aaKnown RBP16.11■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF391Q9UJN7 358 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 PPIAL4AQ9Y536 164 aa16.11■□□□□ 0.17
PTCH1-227ENST00000553256 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-227ENST00000553256 J3QRE1 110 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 MAGEB4O15481 346 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-227ENST00000553256 PHF1O43189 567 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-227ENST00000553256 FOXH1O75593 365 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF12P17014 697 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 GABRB1P18505 474 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 GATA3P23771 443 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF154Q13106 437 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF322Q6U7Q0 402 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-227ENST00000553256 LYPD2Q6UXB3 125 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 ZNF826PQ6ZT77 177 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 CBR4Q8N4T8 237 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 CSNK2A3Q8NEV1 391 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 HPSE2Q8WWQ2 592 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 MROQ9BYG7 248 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms