RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ZNF597Q96LX8 424 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RILPQ96NA2 401 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ALKBH3Q96Q83 286 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 NODALQ96S42 347 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PSMB7Q99436 277 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 VAT1Q99536 393 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 GABRG3Q99928 467 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF2Q9BSG1 426 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 OSBPL11Q9BXB4 747 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MAP1LC3AQ9H492 121 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PRORYQ9H606 182 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF442Q9H7R0 627 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 UGT1A7Q9HAW7 530 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MYOZ1Q9NP98 299 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 CD84Q9UIB8 345 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 VDAC3Q9Y277 283 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 TP53TG1Q9Y2A0 90 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ALG5Q9Y673 324 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MED14O60244 1454 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ROCK2O75116 1388 aaKnown RBP3.43□□□□□ -1.86
USP44-208ENST00000552440 VWDEQ8N2E2 1590 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 ZNF816-ZNF321PA0A0X1KG74 233 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 LAD1O00515 517 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 TNFSF12O43508 249 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 SLC22A5O76082 557 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 CDH1P12830 882 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 GTF2F2P13984 249 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 ALOX5APP20292 161 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 RAB5AP20339 215 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 IFNGR2P38484 337 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 GABRA4P48169 554 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 GSK3BP49841 420 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 RAB7AP51149 207 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 FABP6P51161 128 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.86
USP44-208ENST00000552440 RPL18AQ02543 176 aaKnown RBP3.43□□□□□ -1.86
USP44-208ENST00000552440 NFATC4Q14934 902 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 FAM19A5Q7Z5A7 132 aaPredicted RBP3.43□□□□□ -1.86
USP44-208ENST00000552440 TMEM144Q7Z5S9 345 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 SLC30A8Q8IWU4 369 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 OR2T6Q8NHC8 308 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 C16orf78Q8WTQ4 265 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 ZNRF4Q8WWF5 429 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 ARPC1AQ92747 370 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 OR10C1Q96KK4 312 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 FAM218AQ96MZ4 157 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 MCHR1Q99705 422 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 OR51J1Q9H342 316 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 AMBNQ9NP70 447 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 TAS2R13Q9NYV9 303 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 GLTPQ9NZD2 209 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 INSL5Q9Y5Q6 135 aa3.43□□□□□ -1.86
USP44-208ENST00000552440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.43□□□□□ -1.86
USP44-208ENST00000552440 ZNF518AQ6AHZ1 1483 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 LOC100131303A0A0U1RQF7 123 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 M0R1B8 84 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 GABRPO00591 440 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 TNFRSF13BO14836 293 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 NUDT14O95848 222 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 CD55P08174 381 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 CST2P09228 141 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 LIFP15018 202 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ADORA1P30542 326 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 CCKARP32238 428 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 GALR1P47211 349 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 HOXA1P49639 335 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 GPM6AP51674 278 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 TCL1AP56279 114 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 Q0VFX4 171 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 TAB1Q15750 504 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 HLA-DRB5Q30154 266 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 SIRPB2Q5JXA9 342 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ACER2Q5QJU3 275 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 FHL5Q5TD97 284 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 C8orf82Q6P1X6 216 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 C12orf54Q6X4T0 127 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 SLC36A1Q7Z2H8 476 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 RBM23Q86U06 439 aaKnown RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 C10orf107Q8IVU9 208 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 GPR32P1Q8NGA4 272 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 RFESDQ8TAC1 157 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ZNF564Q8TBZ8 553 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 LZICQ8WZA0 190 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 FGF11Q92914 225 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 FGGYQ96C11 551 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ZMYND19Q96E35 227 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 MRAP2Q96G30 205 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 MAGEB18Q96M61 343 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ZIM3Q96PE6 472 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ZNF385AQ96PM9 386 aaKnown RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 DOK1Q99704 481 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 RARRES2Q99969 163 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 ZNF446Q9NWS9 450 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 FAM206AQ9NX38 181 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 RIMS3Q9UJD0 308 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 CEP170BQ9Y4F5 1589 aaPredicted RBP3.42□□□□□ -1.86
USP44-208ENST00000552440 A2ML1A8K2U0 1454 aa3.42□□□□□ -1.86
USP44-208ENST00000552440 MLH3Q9UHC1 1453 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms