RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 FGFRL1Q8N441 504 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 FAM216BQ8N7L0 139 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 COPS4Q9BT78 406 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 FAM234AQ9H0X4 552 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 OR52D1Q9H346 318 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 DNAJB11Q9UBS4 358 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 PRPF19Q9UMS4 504 aaKnown RBP11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 CAPN7Q9Y6W3 813 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 NOTCH3Q9UM47 2321 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 A0A1B0GW55 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 XRCC2O43543 280 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 IDH3BO43837 385 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 TIPRLO75663 272 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L2P0CJ85 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L3P0CJ86 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L4P0CJ87 422 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L5P0CJ88 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L6P0CJ89 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L7P0CJ90 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 SAA4P35542 130 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 UBE2E1P51965 193 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 SLC7A2P52569 658 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 EFNB2P52799 333 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 PRB3Q04118 309 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 ACSM1Q08AH1 577 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 IKZF1Q13422 519 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 TAF13Q15543 124 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4L9Q6RFH8 374 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DPY19L4Q7Z388 723 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DTX3Q8N9I9 347 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 SDR9C7Q8NEX9 313 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 OR52J3Q8NH60 311 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 H1FXQ92522 213 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 FN3KQ9H479 309 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 RAB18Q9NP72 206 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 MRPL22Q9NWU5 206 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 NDUFAF4Q9P032 175 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 DUX4Q9UBX2 424 aa11.62□□□□□ -0.55
CHMP1A-210ENST00000551981 NKX6-3A6NJ46 265 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 H3BUX3 64 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 NDUFAB1O14561 156 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 ACOT8O14734 319 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 SLC22A2O15244 555 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 XPNPEP2O43895 674 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 KIR2DS4P43632 304 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 LOXL3P58215 753 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 SMIM11AP58511 58 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 DBPQ10586 325 aaPredicted RBP11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 KLRD1Q13241 179 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 PGBD2Q6P3X8 592 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 C1orf122Q6ZSJ8 110 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 Q8N7P7 452 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 C11orf44Q8N8P7 122 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 PROKR2Q8NFJ6 384 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 OR1M1Q8NGA1 313 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 CFHR4Q92496 578 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 CLPTM1LQ96KA5 538 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 HOPXQ9BPY8 73 aaPredicted RBP11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 DNTTIP1Q9H147 329 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 METTL8Q9H825 291 aaKnown RBP11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 ADA2Q9NZK5 511 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 SIGLEC9Q9Y336 463 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 N6AMT1Q9Y5N5 214 aa11.61□□□□□ -0.55
CHMP1A-210ENST00000551981 M0R1W7 72 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 NME4O00746 187 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 GSK3BP49841 420 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 PRKXP51817 358 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 BLMHQ13867 455 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 WDR82Q6UXN9 313 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 DCXRQ7Z4W1 244 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 ZDHHC21Q8IVQ6 265 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 PNKDQ8N490 385 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 OR4S1Q8NGB4 309 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 OR9Q1Q8NGQ5 310 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 RP9Q8TA86 221 aaKnown RBP11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 SGCDQ92629 289 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 SPSB4Q96A44 273 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 DHRS1Q96LJ7 313 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 KCNJ15Q99712 375 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 RANBP3Q9H6Z4 567 aaPredicted RBP11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 NECAP2Q9NVZ3 263 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 FOXJ3Q9UPW0 622 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 MAB21L2Q9Y586 359 aa11.6□□□□□ -0.55
CHMP1A-210ENST00000551981 A0A1W2PQ09 198 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms