RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 CALHM2Q9HA72 323 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 B3GNT2Q9NY97 397 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 NKIRAS2Q9NYR9 191 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 KLK13Q9UKR3 277 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 ELF5Q9UKW6 265 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-208ENST00000551338 TIMM10BQ9Y5J6 103 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 RTTNQ86VV8 2226 aa10.05□□□□□ -0.8
RAB5C-208ENST00000551338 A0A0A6YYD4 124 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 A0A1B0GUH1 482 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 METTL21EPA6NDL7 271 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TMEM235A6NFC5 223 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TM4SF5O14894 197 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 ALX3O95076 343 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 GTF2F2P13984 249 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 STOMP27105 288 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TNFSF10P50591 281 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 MECP2P51608 486 aaKnown RBP10.04□□□□□ -0.8
RAB5C-208ENST00000551338 PCBD1P61457 104 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 MAB21L1Q13394 359 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 UBE2V2Q15819 145 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 RAB12Q6IQ22 244 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 NUFIP2Q7Z417 695 aaKnown RBP10.04□□□□□ -0.8
RAB5C-208ENST00000551338 FGD2Q7Z6J4 655 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 RTN4RL2Q86UN3 420 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 LIX1LQ8IVB5 337 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 GABRG1Q8N1C3 465 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 TMEM229BQ8NBD8 167 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 FDCSPQ8NFU4 85 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 OR4D10Q8NGI6 311 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 OR2AE1Q8NHA4 323 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 PP6455Q8WZ26 134 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 WDYHV1Q96HA8 205 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 MS4A3Q96HJ5 214 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 NICN1Q9BSH3 213 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 PRRG4Q9BZD6 226 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 ZMAT3Q9HA38 289 aaKnown RBP10.04□□□□□ -0.8
RAB5C-208ENST00000551338 BEX1Q9HBH7 125 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 PARPBPQ9NWS1 579 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 PIGLQ9Y2B2 252 aa10.04□□□□□ -0.8
RAB5C-208ENST00000551338 A0A1W2PP11 408 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 DHRS7CA6NNS2 312 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 SMLR1H3BR10 107 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ICMTO60725 284 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 CDC14BO60729 498 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 MTRF1O75570 445 aaKnown RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 SCGNO76038 276 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 MPIG6BO95866 241 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 C1QBP02746 253 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 HPXP02790 462 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 LCATP04180 440 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 CD3DP04234 171 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 FCER2P06734 321 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 YES1P07947 543 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 MELTFP08582 738 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ACKR3P25106 362 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 RAD52P43351 418 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 CCL11P51671 97 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 TAS2R19P59542 299 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 TNK1Q13470 666 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 RNPS1Q15287 305 aaKnown RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 DMRTC1Q5HYR2 192 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 STEAP1BQ6NZ63 245 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF782Q6ZMW2 699 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 Q6ZTK2 550 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 PIAS4Q8N2W9 510 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 TMEM104Q8NE00 496 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 NPRL2Q8WTW4 380 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 CAPSLQ8WWF8 208 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 DVL3Q92997 716 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 REEP6Q96HR9 211 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 GPER1Q99527 375 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 SEC22CQ9BRL7 303 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 TRAF4Q9BUZ4 470 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-208ENST00000551338 LDAHQ9H6V9 325 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 NOX3Q9HBY0 568 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 GPR173Q9NS66 373 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ING3Q9NXR8 418 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 ATPIF1Q9UII2 106 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 DOCK7Q96N67 2140 aa10.03□□□□□ -0.8
RAB5C-208ENST00000551338 hCG_38984A0A1B0GV85 526 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 OR6C65A6NJZ3 312 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 SSX5O60225 188 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 RAB3DO95716 219 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 TGM6O95932 706 aa10.02□□□□□ -0.81
RAB5C-208ENST00000551338 CD74P04233 296 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms