RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 CAPN7Q9Y6W3 813 aa2.92□□□□□ -1.94
LIMA1-206ENST00000550611 WNK2Q9Y3S1 2297 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ARHGAP32A7KAX9 2087 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TRBV5-3A0A0A0MS03 114 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 IGHV2-70DA0A0C4DH43 119 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ISPDA4D126 451 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CBY3A6NI87 242 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CEACAM18A8MTB9 384 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 FAM25EA8MYX2 175 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 USP17L23D6RBM5 183 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 NPIPB11E5RHQ5 1161 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 LRRN3E7EW58 273 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 E9PBE3 544 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM178BH3BS89 294 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 H3BSA7 217 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 K7EIL1 84 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 HSPB6O14558 160 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ITM2AO43736 263 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 AHCYL1O43865 530 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ENTPD5O75356 428 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TSPAN9O75954 239 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 LYPD3O95274 346 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 KRT75O95678 551 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PTHP01270 115 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OPN1MWP04001 364 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CRYBA1P05813 215 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 BPGMP07738 259 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ACAA1P09110 424 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZCCHC18P0CG32 403 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PGA4P0DJD7 388 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PGA3P0DJD8 388 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OPN1MW2P0DN77 364 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OPN1MW3P0DN78 364 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 THRBP10828 461 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ETFAP13804 333 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 NCF2P19878 526 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CBLP22681 906 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 AHCYP23526 432 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 S100A3P33764 101 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CSNK1A1P48729 337 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CRISP3P54108 245 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 BIDP55957 195 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 BTG1P62324 171 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 GLO1Q04760 184 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CKAP4Q07065 602 aaKnown RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PUDPQ08623 228 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 LRRC74AQ0VAA2 488 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PSG7Q13046 419 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 WHAMMP3Q1A5X7 153 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TBC1D28Q2M2D7 210 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ODF3L2Q3SX64 289 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF718Q3SXZ3 478 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 DMRTC1Q5HYR2 192 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CASC10Q5T4H9 136 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM53Q6P2H8 277 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ULK3Q6PHR2 472 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 DHRS4L2Q6PKH6 230 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF841Q6ZN19 808 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF620Q6ZNG0 422 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 Q6ZR03 302 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF621Q6ZSS3 439 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 Q6ZSV7 163 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF101Q8IZC7 436 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SPICQ8N5J4 248 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 RBM15BQ8NDT2 890 aaKnown RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 GJC3Q8NFK1 279 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OR4K5Q8NGD3 323 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OR1J1Q8NGS3 322 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OR6N1Q8NGY5 312 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SLC25A40Q8TBP6 338 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 AGR3Q8TD06 166 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 DNAJA4Q8WW22 397 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 GEMIN6Q8WXD5 167 aaKnown RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 DYRK2Q92630 601 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 MCHR2Q969V1 340 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 NABP1Q96AH0 204 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SLC25A44Q96H78 314 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM19Q96HH6 336 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 FAM71F1Q96KD3 344 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CMTM3Q96MX0 182 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 WDFY2Q96P53 400 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 PANX1Q96RD7 426 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZNF607Q96SK3 696 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ARHGDIGQ99819 225 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 WFDC6Q9BQY6 131 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 TMEM43Q9BTV4 400 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OR2J1Q9GZK6 312 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 C20orf27Q9GZN8 174 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 EGLN1Q9GZT9 426 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 OR51B6Q9H340 312 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 MUC13Q9H3R2 512 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 RABEP2Q9H5N1 569 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 RNF121Q9H920 327 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 MARCH7Q9H992 704 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SIAEQ9HAT2 523 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 CDH20Q9HBT6 801 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SPAG4Q9NPE6 437 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms