RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 DMKNQ6E0U4 476 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-206ENST00000550406 KRT74Q7RTS7 529 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 OR10AC1Q8NH08 325 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-206ENST00000550406 NINJ1Q92982 152 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-206ENST00000550406 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-206ENST00000550406 PDCD1LG2Q9BQ51 273 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 TPK1Q9H3S4 243 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 OPA3Q9H6K4 179 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 ZNF391Q9UJN7 358 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 BLOC1S6Q9UL45 172 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 ERGIC3Q9Y282 383 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 PMF1-BGLAPU3KQ54 211 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 V9GYS6 101 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 ARID1AO14497 2285 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MYL12BO14950 172 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 SPRY3O43610 288 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 NCR1O76036 304 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 LY6HO94772 140 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 ZFPL1O95159 310 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 IGHV4-39P01824 125 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 ISG15P05161 165 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 ADH4P08319 380 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 SELEP16581 610 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 PCMT1P22061 227 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 CFL1P23528 166 aaKnown RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 EEF1B2P24534 225 aaKnown RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MAGEB1P43366 347 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 PTH2RP49190 550 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 ZNF81P51508 661 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MRPL28Q13084 256 aaKnown RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MOGQ16653 247 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 CCDC58Q4VC31 144 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 RPL22L1Q6P5R6 122 aaKnown RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 SPARTQ8N0X7 666 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 DVL3Q92997 716 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 VRK1Q99986 396 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MND1Q9BWT6 205 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 CCDC90BQ9GZT6 254 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 FGF23Q9GZV9 251 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 BEX4Q9NWD9 120 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-206ENST00000550406 LRCH1Q9Y2L9 728 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 RHBDD3Q9Y3P4 386 aa11.09□□□□□ -0.63
RAB5C-206ENST00000550406 TRBV2A0A0J9YWF9 115 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 LOC107986453A0A1B0GWG9 222 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 A6NIN4 97 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 MRPS14O60783 128 aaKnown RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 HPXP02790 462 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 CA6P23280 308 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 LIPAP38571 399 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 DDOSTP39656 456 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 MAP2K3P46734 347 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 CHN2P52757 468 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 EMX1Q04741 257 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 ACSM1Q08AH1 577 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 HNRNPA0Q13151 305 aaKnown RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 SPHARQ15513 63 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 TSTQ16762 297 aaKnown RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 KCTD21Q4G0X4 260 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 TMEM244Q5VVB8 128 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 DOK3Q7L591 496 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 KRTAP1-3Q8IUG1 177 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 OR51A4Q8NGJ6 313 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 OR13G1Q8NGZ3 307 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 PGLYRP3Q96LB9 341 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 ACOT13Q9NPJ3 140 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 CGGBP1Q9UFW8 167 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 GPR160Q9UJ42 338 aa11.08□□□□□ -0.64
RAB5C-206ENST00000550406 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-206ENST00000550406 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
RAB5C-206ENST00000550406 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 SYT7O43581 403 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 PLPP2O43688 288 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 DHRS3O75911 302 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 F12P00748 615 aaPredicted RBP11.07□□□□□ -0.64
RAB5C-206ENST00000550406 CST4P01036 141 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 CD55P08174 381 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 UBCP0CG48 685 aaKnown RBP11.07□□□□□ -0.64
RAB5C-206ENST00000550406 BMP4P12644 408 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 ATP6V1B1P15313 513 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 FAHP16930 419 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 ACHEP22303 614 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 RPS11P62280 158 aaKnown RBP eCLIP11.07□□□□□ -0.64
RAB5C-206ENST00000550406 CCL8P80075 99 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 RIPPLY1Q0D2K3 151 aa11.07□□□□□ -0.64
RAB5C-206ENST00000550406 TBCEQ15813 527 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms