RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF701Q9NV72 531 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 RASL12Q9NYN1 266 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 EXPH5Q8NEV8 1989 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 TRBV5-7A0A0A0MS05 114 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 C3orf80F5H4A9 247 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 PMS2P2O95744 297 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ASAH2BP0C7U1 165 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 SLC18B1Q6NT16 456 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 GTPBP8Q8N3Z3 284 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 LIN37Q96GY3 246 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 RNF222A6NCQ9 220 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 TUBAL3A6NHL2 446 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 B4E171 279 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 IGHV3-9P01782 118 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 PATE4P0C8F1 98 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 CD96P40200 585 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 MPLP40238 635 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 TSPAN7P41732 249 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 SLC26A5P58743 744 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 EEF1A1P5Q5VTE0 462 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 EXD3Q8N9H8 876 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 FBXO17Q96EF6 278 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 OR8B4Q96RC9 309 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 CMSS1Q9BQ75 279 aaKnown RBP9.83□□□□□ -0.84
LINC00661-204ENST00000549354 UPB1Q9UBR1 384 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 BDP1A6H8Y1 2624 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 C5orf63A6NC05 138 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 SULT1C2O00338 296 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 ABCD4O14678 606 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 RER1O15258 196 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 SYT7O43581 403 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 OR2T1O43869 369 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 TXNDC12O95881 172 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 ITGB2P05107 769 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 PVALBP20472 110 aaPredicted RBP9.83□□□□□ -0.84
LINC00661-204ENST00000549354 PPIAP62937 165 aaKnown RBP9.83□□□□□ -0.84
LINC00661-204ENST00000549354 C9orf135Q5VTT2 229 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 ANGPTL5Q86XS5 388 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF679Q8IYX0 411 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 OR5L2Q8NGL0 311 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 OR5B2Q96R09 309 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 GPHA2Q96T91 129 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 PARPBPQ9NWS1 579 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 C19orf25Q9UFG5 118 aaPredicted RBP9.83□□□□□ -0.84
LINC00661-204ENST00000549354 RHBDD3Q9Y3P4 386 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 CSAG2Q9Y5P2 127 aa9.83□□□□□ -0.84
LINC00661-204ENST00000549354 CADP27708 2225 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 PRSS37A4D1T9 235 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF208O43345 1280 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 RAMP1O60894 148 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 NPIPB7O75200 414 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 DKK1O94907 266 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ACTL6AO96019 429 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 PGCP20142 388 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CLVS2Q5SYC1 327 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 C1orf140Q5VVS0 124 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 TMEM17Q86X19 198 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 LDLRAD3Q86YD5 345 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 TMEM104Q8NE00 496 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 OR5M8Q8NGP6 311 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 C15orf40Q8WUR7 153 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 C20orf24Q9BUV8 137 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 TLNRD1Q9H1K6 362 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 METTL8Q9H825 291 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CNTD2Q9H8S5 307 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF275Q9NSD4 429 aaPredicted RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ASH2LQ9UBL3 628 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 TMEM14AQ9Y6G1 99 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ETV2O00321 342 aaPredicted RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CRTAPO75718 401 aaPredicted RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 STK17BO94768 372 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 UBBP0CG47 229 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 UBCP0CG48 685 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 RAB3AP20336 220 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CSRP1P21291 193 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 SERPINF1P36955 418 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CASRP41180 1078 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 KCNJ3P48549 501 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 UBA52P62987 128 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 LPAL2Q16609 132 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 H3F3CQ6NXT2 135 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 ETV3LQ6ZN32 361 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 MAMDC2Q7Z304 686 aaPredicted RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 C12orf57Q99622 126 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CRB3Q9BUF7 120 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 GLS2Q9UI32 602 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 B3GALT1Q9Y5Z6 326 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 AQP8O94778 261 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 GLAP06280 429 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 CELA2AP08217 269 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 HSD11B1P28845 292 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 SLC25A1P53007 311 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 SUMO3P55854 103 aaPredicted RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 GLO1Q04760 184 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 PAN3Q58A45 887 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms