RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 METTL7AQ9H8H3 244 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 KLHL13Q9P2N7 655 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4Q9UBX2 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 ZNF878C9JN71 531 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 GABREP78334 506 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 ZSCAN4Q8NAM6 433 aaPredicted RBP13.96□□□□□ -0.17
LDLR-204ENST00000545707 TMED6Q8WW62 240 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 NKX6-2Q9C056 277 aaPredicted RBP13.96□□□□□ -0.17
LDLR-204ENST00000545707 COL5A1P20908 1838 aaPredicted RBP13.96□□□□□ -0.17
LDLR-204ENST00000545707 IGKV1-9A0A0C4DH69 117 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 TRAF3IP2O43734 574 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 QDPRP09417 244 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 HIST1H1DP16402 221 aaKnown RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 IGFBP4P22692 258 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 PTGDSP41222 190 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 P2RY4P51582 365 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 GPR85P60893 370 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 CLEC18BQ6UXF7 455 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 DTX1Q86Y01 620 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 ZNF283Q8N7M2 679 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 NOXO1Q8NFA2 376 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 WDR77Q9BQA1 342 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 TMEM59Q9BXS4 323 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 AKIRIN1Q9H9L7 192 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 SDHAF3Q9NRP4 125 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 SLC39A1Q9NY26 324 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 RALGAPA1Q6GYQ0 2036 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 NPIPB13A6NJU9 1138 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 NPIPB4C9JG80 1138 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 IGHG1P01857 330 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 CX3CR1P49238 355 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 ARFRP1Q13795 201 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 ZNF169Q14929 603 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 SGCAQ16586 387 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 GUCA2BQ16661 112 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 RHBDD2Q6NTF9 364 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 FAHD2BQ6P2I3 314 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 GTPBP8Q8N3Z3 284 aaPredicted RBP13.95□□□□□ -0.18
LDLR-204ENST00000545707 PHYHIPLQ96FC7 376 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 FAHD2AQ96GK7 314 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 TMEM231Q9H6L2 316 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 OR5AC2Q9NZP5 309 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 GPR132Q9UNW8 380 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
LDLR-204ENST00000545707 F12P00748 615 aaPredicted RBP13.94□□□□□ -0.18
LDLR-204ENST00000545707 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
LDLR-204ENST00000545707 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
LDLR-204ENST00000545707 TMEM128Q5BJH2 165 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 PDSS1Q5T2R2 415 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 PRAMEF20Q5VT98 475 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 A0A1W2PNV4 684 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 ABCD4O14678 606 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 ACTL6AO96019 429 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 ADCYAP1P18509 176 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 GLRA1P23415 457 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 SUPT4H1P63272 117 aaKnown RBP13.94□□□□□ -0.18
LDLR-204ENST00000545707 ANKRD55Q3KP44 614 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 KCNG3Q8TAE7 436 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 OR10C1Q96KK4 312 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
LDLR-204ENST00000545707 OR2S2Q9NQN1 319 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
LDLR-204ENST00000545707 CHRM2P08172 466 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 SRFP11831 508 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 SUMO3P55854 103 aaPredicted RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 PLEKHN1Q494U1 663 aaPredicted RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 PUSL1Q8N0Z8 303 aaKnown RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 CADM4Q8NFZ8 388 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 OR13G1Q8NGZ3 307 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 OR51F2Q8NH61 342 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 NUBPLQ8TB37 319 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 MRGPRX4Q96LA9 322 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 TSNAXQ99598 290 aaKnown RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 TGIF2Q9GZN2 237 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 PIGMQ9H3S5 423 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 ZNF768Q9H5H4 540 aaKnown RBP13.93□□□□□ -0.18
LDLR-204ENST00000545707 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 CYTL1Q9NRR1 136 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 SEMA5BQ9P283 1151 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 SRPK3Q9UPE1 567 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 ATG12O94817 140 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 ZNF43P17038 809 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 AMY2BP19961 511 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 NKAPLQ5M9Q1 402 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 SLC25A47Q6Q0C1 308 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 PGAP1Q75T13 922 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 FOXRED2Q8IWF2 684 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 CLRN3Q8NCR9 226 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 OR51T1Q8NGJ9 327 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 ZNF416Q9BWM5 594 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms