RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TAS2R45P59539 299 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 BHLHE23Q8NDY6 225 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 OR10P1Q8NGE3 313 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 RTN4IP1Q8WWV3 396 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-209ENST00000545689 RAB18Q9NP72 206 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 A0A1W2PQD3 144 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF891A8MT65 544 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 TOX3O15405 576 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 KIAA0141Q14154 515 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 FAM27D1Q5T7N8 215 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 MOB1BQ7L9L4 216 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 DUSP18Q8NEJ0 188 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 TSPAN32Q96QS1 320 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 TAAR9Q96RI9 348 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 USB1Q9BQ65 265 aaKnown RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 AKR7A2O43488 359 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 RPS27P42677 84 aaKnown RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 MRM1Q6IN84 353 aaKnown RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 VN1R4Q7Z5H5 301 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 ADAM19Q9H013 955 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 TMEM272A0A1B0GTI8 110 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 SSSCA1O60232 199 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 EMP3P54852 163 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 OR5AS1Q8N127 324 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 OR6C68A6NDL8 312 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 CCL7P80098 99 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 H1FXQ92522 213 aaKnown RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 MAP6Q96JE9 813 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 GLRA1P23415 457 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 UBE2IP63279 158 aaKnown RBP11.25□□□□□ -0.61
COL4A6-209ENST00000545689 ISXQ2M1V0 245 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 EDARADDQ8WWZ3 215 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 TUBG2Q9NRH3 451 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 SERGEFQ9UGK8 458 aa11.25□□□□□ -0.61
COL4A6-209ENST00000545689 IGHA1P01876 353 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ADH4P08319 380 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 CD37P11049 281 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 MYBPHQ13203 477 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 BATFQ16520 125 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 AMER3Q8N944 861 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 NTNG2Q96CW9 530 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 FOXB1Q99853 325 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 FAM173AQ9BQD7 235 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 SHARPINQ9H0F6 387 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 NDRG3Q9UGV2 375 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 SIRPB1O00241 398 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 GPR31O00270 319 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 BHLHE40O14503 412 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 CYC1P08574 325 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF239Q16600 458 aaKnown RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 BAGE3Q86Y29 109 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 BAGE2Q86Y30 109 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 CMTM2Q8TAZ6 248 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 WDR89Q96FK6 387 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 VN1R1Q9GZP7 353 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ING1Q9UK53 422 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 FIGNL2A6NMB9 653 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 NXPH3O95157 252 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 EDN3P14138 238 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 DRD3P35462 400 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 GSK3AP49840 483 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 EIF4EBP2Q13542 120 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ANKRD37Q7Z713 158 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 PPP5D1E7EU14 171 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 COX5AP20674 150 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 FUT3P21217 361 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 PLEKHB1Q9UF11 243 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 SH3BGRL2Q9UJC5 107 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 OGG1O15527 345 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 CD80P33681 288 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 IRF3Q14653 427 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF718Q3SXZ3 478 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 ZC3HAV1LQ96H79 300 aaKnown RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 SPACA5Q96QH8 159 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
COL4A6-209ENST00000545689 PPP1R3CQ9UQK1 317 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
COL4A6-209ENST00000545689 SLC22A20A6NK97 555 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 H7BYZ3 331 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
COL4A6-209ENST00000545689 HAAOP46952 286 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 SLC25A26Q70HW3 274 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OR4S1Q8NGB4 309 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 HGDQ93099 445 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 DHRS9Q9BPW9 319 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 CTAG2O75638 210 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ZFPL1O95159 310 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 B4GALT1P15291 398 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms