RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 CD3GP09693 182 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 UBCP0CG48 685 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 EDN3P14138 238 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GABRA1P14867 456 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PSMB1P20618 241 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 COX5AP20674 150 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 MSR1P21757 451 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ACHEP22303 614 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GIFP27352 417 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 BTCP35070 178 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PTGER4P35408 488 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 TIMP3P35625 211 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 MMP16P51512 607 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 CTAG1AP78358 180 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 DGCR2P98153 550 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 IFITM2Q01629 132 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 EIF2B1Q14232 305 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FAM189A2Q15884 450 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 KRTAP27-1Q3LI81 207 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 WDR38Q5JTN6 314 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FAM27BQ5VT28 67 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 METTL11BQ5VVY1 283 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 OLFML2AQ68BL7 652 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ANKRD16Q6P6B7 361 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 CHMP1BQ7LBR1 199 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 CATSPERDQ86XM0 798 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GABRG1Q8N1C3 465 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 NKAIN3Q8N8D7 197 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 RNF133Q8WVZ7 376 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 RADILQ96JH8 1075 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 RNF170Q96K19 258 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 BBC3Q96PG8 261 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 DMRTA2Q96SC8 542 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FOXB1Q99853 325 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PRRG4Q9BZD6 226 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GHITMQ9H3K2 345 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 C12orf49Q9H741 205 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GPN1Q9HCN4 374 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ZNF107Q9UII5 783 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GDF2Q9UK05 429 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FBXL3Q9UKT7 428 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 R4GMQ9 66 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 USP9XQ93008 2570 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 A0A0A6YYJ9 748 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 LOC100289279A0A1B0GTE1 492 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FIGNL2A6NMB9 653 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SCGNO76038 276 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 CSF1P09603 554 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ANXA3P12429 323 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 C4BPBP20851 252 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 IGHV1-2P23083 117 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 OTX1P32242 354 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SOX2P48431 317 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 MECP2P51608 486 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 LSM6P62312 80 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ARF1P84077 181 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 MFGE8Q08431 387 aaPredicted RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SF3B4Q15427 424 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 RAB11BQ15907 218 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ST3GAL2Q16842 350 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 NRN1LQ496H8 165 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FBXW9Q5XUX1 488 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 KLHL24Q6TFL4 600 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GFRALQ6UXV0 394 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ZNF767PQ75MW2 155 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 DCXRQ7Z4W1 244 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SKA3Q8IX90 412 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PRSS35Q8N3Z0 413 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ST6GALNAC3Q8NDV1 305 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 OR10H5Q8NGA6 315 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 OR6K3Q8NGY3 331 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SUN5Q8TC36 379 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 SLC25A38Q96DW6 304 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ZNF75AQ96N20 296 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 FYTTD1Q96QD9 318 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 GFI1Q99684 422 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 TMEM246Q9BRR3 403 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 RBM24Q9BX46 236 aaKnown RBP6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 OR51J1Q9H342 316 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 MOB1AQ9H8S9 216 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PLSCR4Q9NRQ2 329 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 PARPBPQ9NWS1 579 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 ASH2LQ9UBL3 628 aa6.11□□□□□ -1.43
HMGCS2-204ENST00000544913 A0A0G2JNJ9 132 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 A0A1B0GUH1 482 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 C5orf63A6NC05 138 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 OR6C65A6NJZ3 312 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 SNRPGP15A8MWD9 76 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 E9PLN8 166 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 H7C417 338 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 IL5P05113 134 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 PATE4P0C8F1 98 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 GSTT2P0CG29 244 aa6.1□□□□□ -1.43
HMGCS2-204ENST00000544913 SFTPCP11686 197 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms