RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 POMPQ9Y244 141 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 IER3IP1Q9Y5U9 82 aa10.53□□□□□ -0.72
USP28-212ENST00000544750 TRAV38-1A0A0B4J264 116 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 TCRBV3S1A0A5B6 114 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 OOEPA6NGQ2 149 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 SOCS2O14508 198 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 SLC16A7O60669 478 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.73
USP28-212ENST00000544750 PPP1R3DO95685 299 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 ECDO95905 644 aaPredicted RBP10.52□□□□□ -0.73
USP28-212ENST00000544750 CDKN2AP42771 156 aaKnown RBP10.52□□□□□ -0.73
USP28-212ENST00000544750 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.73
USP28-212ENST00000544750 RFX4Q33E94 735 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 GPR139Q6DWJ6 353 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 FGFRL1Q8N441 504 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 GCSAMQ8N6F7 178 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 GJC3Q8NFK1 279 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 GNPDA2Q8TDQ7 276 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 HCAR1Q9BXC0 346 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 FN3KRPQ9HA64 309 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 AURKAIP1Q9NWT8 199 aaPredicted RBP10.52□□□□□ -0.73
USP28-212ENST00000544750 FAM96BQ9Y3D0 163 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 U3KQV3 271 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 TENM3Q9P273 2699 aa10.52□□□□□ -0.73
USP28-212ENST00000544750 DHRS12A0PJE2 317 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 RNASEK-C17orf49H0YIS7 233 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 DCTN6O00399 190 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 XKRYO14609 159 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 DVL1O14640 695 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 ARPC3O15145 178 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 CCNB2O95067 398 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 LHBP01229 141 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 GASTP01350 101 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 GYPAP02724 150 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 ACSM4P0C7M7 580 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 FLOT2Q14254 428 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 OR8B8Q15620 311 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 MEP1BQ16820 701 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 TEX36Q5VZQ5 186 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 Q6ZTK2 550 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 TMEM179BQ7Z7N9 219 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 ADCK1Q86TW2 530 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 NAA40Q86UY6 237 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 OR8D4Q8NGM9 314 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 OR5R1Q8NH85 324 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 PPP1R35Q8TAP8 253 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 TNFRSF14Q92956 283 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 SLCO4A1Q96BD0 722 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 DMRTB1Q96MA1 342 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 CHID1Q9BWS9 393 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 EGLN3Q9H6Z9 239 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 TRIM36Q9NQ86 728 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 FOXJ3Q9UPW0 622 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 SIGLEC9Q9Y336 463 aa10.51□□□□□ -0.73
USP28-212ENST00000544750 SAMHD1Q9Y3Z3 626 aaKnown RBP10.51□□□□□ -0.73
USP28-212ENST00000544750 MEGF11A6BM72 1044 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 BTBD17A6NE02 478 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 BHLHE40O14503 412 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 HIST1H1CP16403 213 aaKnown RBP10.5□□□□□ -0.73
USP28-212ENST00000544750 CA6P23280 308 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 ANOS1P23352 680 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 SLC6A6P31641 620 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 GABRA5P31644 462 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 IFNGR2P38484 337 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 RPS6KA3P51812 740 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 MICAQ29983 383 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 VAX1Q5SQQ9 334 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 CORO6Q6QEF8 472 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 LINC00471Q8N535 108 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 Q8N7P7 452 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 BOLLQ8N9W6 283 aaKnown RBP10.5□□□□□ -0.73
USP28-212ENST00000544750 AQP11Q8NBQ7 271 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 PAPD5Q8NDF8 572 aaKnown RBP10.5□□□□□ -0.73
USP28-212ENST00000544750 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
USP28-212ENST00000544750 DGCR6LQ9BY27 220 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 SLC22A4Q9H015 551 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 REEP1Q9H902 201 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 IL20Q9NYY1 176 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 CAB39Q9Y376 341 aaPredicted RBP10.5□□□□□ -0.73
USP28-212ENST00000544750 CDH10Q9Y6N8 788 aa10.5□□□□□ -0.73
USP28-212ENST00000544750 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 A0A1B0GW55 424 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 NPFFO15130 113 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 GMDSO60547 372 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 CST1P01037 141 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 DUX4L2P0CJ85 424 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 DUX4L3P0CJ86 424 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 DUX4L4P0CJ87 422 aa10.49□□□□□ -0.73
USP28-212ENST00000544750 DUX4L5P0CJ88 424 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms