RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	LHB	P01229	141 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	FGF4	P08620	206 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	UBC	P0CG48	685 aa	Known RBP	2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	ANXA8	P13928	327 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	GGT2	P36268	569 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	RPS5	P46782	204 aa	Known RBP	2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	UBE2E1	P51965	193 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	IRF8	Q02556	426 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	RAD51	Q06609	339 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	DMC1	Q14565	340 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	RPEL1	Q2QD12	228 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	ANXA8L1	Q5VT79	327 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	OPN5	Q6U736	354 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	SPINT4	Q6UDR6	99 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	CD300LG	Q6UXG3	332 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	MDP1	Q86V88	176 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	CALHM3	Q86XJ0	350 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	ZNF547	Q8IVP9	402 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	LINC00304	Q8N9R0	145 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	KLF14	Q8TD94	323 aa	Predicted RBP	2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	WDR34	Q96EX3	536 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	OPALIN	Q96PE5	141 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	OR4K3	Q96R72	315 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	KCNS3	Q9BQ31	491 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	NUDT9	Q9BW91	350 aa		2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	2.1	□□□□□ -2.07
RAP1B-231	ENST00000544639	TRIP11	Q15643	1979 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639		A0A1W2PRD5	423 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	C16orf90	A8MZG2	172 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	CASQ2	O14958	399 aa	Predicted RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	GATB	O75879	557 aa	Known RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	TDP2	O95551	362 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	TGM6	O95932	706 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	KRT16	P08779	473 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	TACSTD2	P09758	323 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	TCP1	P17987	556 aa	Known RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	GDI2	P50395	445 aa	Known RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	IFITM3	Q01628	133 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	GABRA6	Q16445	453 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	RWDD4	Q6NW29	188 aa	Known RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	TMPRSS11A	Q6ZMR5	421 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	FAM122B	Q7Z309	247 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	KATNAL2	Q8IYT4	538 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	COMMD1	Q8N668	190 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	ENKUR	Q8TC29	256 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	RERG	Q96A58	199 aa	Predicted RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	ZFP3	Q96NJ6	502 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	DHCR7	Q9UBM7	475 aa	Known RBP	2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	SIGLEC7	Q9Y286	467 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	ZNF257	Q9Y2Q1	563 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	LRRC42	Q9Y546	428 aa		2.09	□□□□□ -2.07
RAP1B-231	ENST00000544639	SCN4A	P35499	1836 aa		2.09	□□□□□ -2.08
RAP1B-231	ENST00000544639	C2orf16	Q68DN1	1984 aa		2.09	□□□□□ -2.08
RAP1B-231	ENST00000544639	SDK2	Q58EX2	2172 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	XRCC2	O43543	280 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	HMMR	O75330	724 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	HSPD1	P10809	573 aa	Known RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	NTF3	P20783	257 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	PCK1	P35558	622 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	CMC4	P56277	68 aa	Predicted RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	GBE1	Q04446	702 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	KDSR	Q06136	332 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	ZNF33A	Q06730	810 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	TFDP2	Q14188	446 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	DEGS2	Q6QHC5	323 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	CASP12	Q6UXS9	341 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	C16orf47	Q6ZP98	133 aa	Predicted RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	UNC93A	Q86WB7	457 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	MICU2	Q8IYU8	434 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	DRAM1	Q8N682	238 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	LRRC75A	Q8NAA5	344 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	OR5M1	Q8NGP8	315 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	CDS1	Q92903	461 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	C9orf72	Q96LT7	481 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	DHX35	Q9H5Z1	703 aa	Known RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	PLEKHF2	Q9H8W4	249 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	CSNK1G1	Q9HCP0	422 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	RBFOX1	Q9NWB1	397 aa	Known RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	AHSP	Q9NZD4	102 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	FARSA	Q9Y285	508 aa	Known RBP	2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	MROH7	Q68CQ1	1323 aa		2.08	□□□□□ -2.08
RAP1B-231	ENST00000544639	BAZ2A	Q9UIF9	1905 aa	Known RBP	2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	HIVEP2	P31629	2446 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639		A0A0A6YYD5	115 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	VGLL3	A8MV65	326 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	GOLGA8T	H3BQL2	631 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	ZBTB5	O15062	677 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	SLC19A2	O60779	497 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	CTNS	O60931	367 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	IGLV2-8	P01709	118 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	TRBV12-3	P01733	135 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	RPN2	P04844	631 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	AP1S2	P56377	157 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	CLDN18	P56856	261 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	OR2B8P	P59922	312 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	RBX1	P62877	108 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	ELF3	P78545	371 aa	Predicted RBP	2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	NAB1	Q13506	487 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	KRTAP5-7	Q6L8G8	165 aa		2.07	□□□□□ -2.08
RAP1B-231	ENST00000544639	CLEC2A	Q6UVW9	174 aa		2.07	□□□□□ -2.08

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms