RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 B3GNT7Q8NFL0 401 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 NEIL1Q96FI4 390 aaPredicted RBP7.94□□□□□ -1.14
VPS13D-212ENST00000543766 VSTM2LQ96N03 204 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 NRIP2Q9BQI9 281 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 RSG1Q9BU20 258 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 MFSD1Q9H3U5 465 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 HACL1Q9UJ83 578 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 OR6C6A6NF89 314 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 A8MT66 165 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 SCG5P05408 212 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
VPS13D-212ENST00000543766 MOB1BQ7L9L4 216 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 ADGRF3Q8IZF5 1079 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 OR13C8Q8NGS7 320 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 ATXN7L3BQ96GX2 97 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 TBC1D17Q9HA65 648 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 RDH14Q9HBH5 336 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 SLAMF8Q9P0V8 285 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 FBXW11Q9UKB1 542 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 DVL1O14640 695 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 C1RP00736 705 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 UFM1P61960 85 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 OC90Q02509 493 aaPredicted RBP7.94□□□□□ -1.14
VPS13D-212ENST00000543766 TMEM107Q6UX40 140 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 SLCO4C1Q6ZQN7 724 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 GPC2Q8N158 579 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 BEST3Q8N1M1 668 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 IQCF1Q8N6M8 205 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 M1APQ8TC57 530 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 LCN9Q8WX39 176 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 SYT3Q9BQG1 590 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 WDR76Q9H967 626 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 RNF122Q9H9V4 155 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 NME7Q9Y5B8 376 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 TRIP11Q15643 1979 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PPIAL4EA0A075B759 164 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PPIAL4CA0A0B4J2A2 164 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 B4DGG1 531 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PPIAL4DF5H284 164 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 LDB2O43679 373 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PPIAL4FP0DN26 164 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PPIAL4GP0DN37 164 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 NME2P22392 152 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MMP11P24347 488 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 REG1BP48304 166 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 AGTR2P50052 363 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 OR10A3P58181 314 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 OR1Q1Q15612 314 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PLEKHS1Q5SXH7 462 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 Q6ZN92 141 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 CASTOR1Q8WTX7 329 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 UBE2FQ969M7 185 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 GALMQ96C23 342 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MSLNLQ96KJ4 702 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 TBX15Q96SF7 602 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ZBP1Q9H171 429 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 TUBB1Q9H4B7 451 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MOB1AQ9H8S9 216 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 SLC17A4Q9Y2C5 497 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 GBF1Q92538 1859 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ETHE1O95571 254 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 IFNA1P01562 189 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ECI1P42126 302 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 NCBP2-AS2Q69YL0 99 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 FAHD1Q6P587 224 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 GRASPQ7Z6J2 395 aaPredicted RBP7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ABHD4Q8TB40 342 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 SH3RF2Q8TEC5 729 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 RNF141Q8WVD5 230 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 RGMAQ96B86 450 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MESP1Q9BRJ9 268 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ABHD14AQ9BUJ0 271 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 HHATLQ9HCP6 504 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DLL4Q9NR61 685 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 CISHQ9NSE2 258 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 SH2B3Q9UQQ2 575 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 CMAHPQ9Y471 501 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DNAJC15Q9Y5T4 150 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DENND4AQ7Z401 1863 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DEGS1O15121 323 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MPZL2O60487 215 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
VPS13D-212ENST00000543766 CCKARP32238 428 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 P2RY2P41231 377 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DNASE1L1P49184 302 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 DAPP51397 102 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 CNN1P51911 297 aaKnown RBP7.93□□□□□ -1.14
VPS13D-212ENST00000543766 GFRA1P56159 465 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 RAB10P61026 200 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 GNG5P63218 68 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ARG2P78540 354 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 UBE2V2Q15819 145 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ZDHHC23Q8IYP9 409 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 FGFRL1Q8N441 504 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 OR2M7Q8NG81 312 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 OR10V1Q8NGI7 309 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms