RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FXYD6P3P58550 94 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MYBPC1Q00872 1141 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 CD47Q08722 323 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TSC22D1Q15714 1073 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 CEACAM16Q2WEN9 425 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 HIKESHIQ53FT3 197 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZMAT1Q5H9K5 638 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 CLEC12AQ5QGZ9 265 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 OR7E24Q6IFN5 339 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 DOK3Q7L591 496 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF433Q8N7K0 673 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 CLDN22Q8N7P3 220 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ARIH2OSQ8N7S6 290 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 SYT14Q8NB59 555 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 NOXO1Q8NFA2 376 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 BBS1Q8NFJ9 593 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 LINC01560Q8TB33 94 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TEX47Q8TBZ9 253 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FNDC8Q8TC99 324 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 DNAJC9Q8WXX5 260 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 HSD17B8Q92506 261 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM54Q969K7 222 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 S100PBPQ96BU1 408 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MBD6Q96DN6 1003 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZC3HAV1LQ96H79 300 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 WFIKKN1Q96NZ8 548 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ERMAPQ96PL5 475 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 RBP7Q96R05 134 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 GPX7Q96SL4 187 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ALG12Q9BV10 488 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TSSK6Q9BXA6 273 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ACTR6Q9GZN1 396 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FN3KQ9H479 309 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 POFUT2Q9Y2G5 429 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FAM96BQ9Y3D0 163 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 LSM4Q9Y4Z0 139 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MTORP42345 2549 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 UTP20O75691 2785 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PCNX1Q96RV3 2341 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 OR6C68A6NDL8 312 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF99A8MXY4 864 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 H0YHG0 523 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PDLIM1O00151 329 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 SOCS2O14508 198 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 IDH3BO43837 385 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 SOX14O95416 240 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TXNDC12O95881 172 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MBPP02686 304 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 COX5AP20674 150 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 S100A5P33763 92 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 GUCA1AP43080 201 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 DAPP51397 102 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF84P51523 738 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FOXG1P55316 489 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 KRR1Q13601 381 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 COTL1Q14019 142 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 THEM4Q5T1C6 240 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FAHD1Q6P587 224 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 LCNL1Q6ZST4 164 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 LINGO2Q7L985 606 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FAM122BQ7Z309 247 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 P2RY8Q86VZ1 359 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TPRA1Q86W33 373 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 WDFY1Q8IWB7 410 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 OR2T33Q8NG76 320 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 OR1K1Q8NGR3 316 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF519Q8TB69 540 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MAGEE2Q8TD90 523 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 FAM222BQ8WU58 562 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MCHR2Q969V1 340 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MUCL1Q96DR8 90 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 Q96M85 177 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 UQCC2Q9BRT2 126 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 MRPL13Q9BYD1 178 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PLA2G12AQ9BZM1 189 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 GABARAPL1Q9H0R8 117 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF226Q9NYT6 803 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 IL20Q9NYY1 176 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ENOPH1Q9UHY7 261 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 OAZ3Q9UMX2 235 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 BAIAP2Q9UQB8 552 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ORC6Q9Y5N6 252 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 INTS1Q8N201 2190 aaKnown RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 PRSS37A4D1T9 235 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 H7C1C5 153 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 ARPC3O15145 178 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 RENP00797 406 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 IGFBP1P08833 259 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 VSIG10L2P0DP72 767 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 HIST1H1CP16403 213 aaKnown RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 PCMT1P22061 227 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 IGFBP5P24593 272 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 CCKARP32238 428 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 UBE2NP61088 152 aaKnown RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 LCN6P62502 163 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 ELF3P78545 371 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 PIGFQ07326 219 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms