RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	EPOP	A6NHQ4	379 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	C10orf142	B7Z368	130 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	RNASEK-C17orf49	H0YIS7	233 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	LRP3	O75074	770 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	MED6	O75586	246 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	HTR3B	O95264	441 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	MEOX2	P50222	304 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	C9orf50	Q5SZB4	431 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	NUBPL	Q8TB37	319 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	ARHGAP5-AS1	Q96IT6	56 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	SMIM8	Q96KF7	97 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	SLC26A1	Q9H2B4	701 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	POLR1D	Q9Y2S0	133 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	CEACAM18	A8MTB9	384 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	CRTAP	O75718	401 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	HEXA	P06865	529 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	HCK	P08631	526 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	HOXB5	P09067	269 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SFTA3	P0C7M3	94 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	PET100	P0DJ07	73 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SLC2A1	P11166	492 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	FBL	P22087	321 aa	Known RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	NME2	P22392	152 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OR3A2	P47893	321 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	GPR85	P60893	370 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	RPL7L1	Q6DKI1	246 aa	Known RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	FOXRED2	Q8IWF2	684 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OR5AS1	Q8N127	324 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ZNF441	Q8N8Z8	693 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OR6S1	Q8NH40	331 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	GPER1	Q99527	375 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SLC7A5P2	Q9GIP4	190 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SEC61A2	Q9H9S3	476 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	TAF9B	Q9HBM6	251 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838		H3BML4	177 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SDCBP	O00560	298 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	AGPAT2	O15120	278 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	GIMD1	P0DJR0	217 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	GLRA1	P23415	457 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	LAP3	P28838	519 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	LPAR6	P43657	344 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	EIF5A	P63241	154 aa	Known RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	PEA15	Q15121	130 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OR13G1	Q8NGZ3	307 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SFT2D1	Q8WV19	159 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	C1orf147	Q96MC9	270 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ST6GALNAC5	Q9BVH7	336 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	DNAJB11	Q9UBS4	358 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SUSD2	Q9UGT4	822 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	CD207	Q9UJ71	328 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838		A0A1W2PPC4	97 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ANKUB1	A6NFN9	424 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ADAM10	O14672	748 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	APOC1	P02654	83 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SERPINA5	P05154	406 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	RCC1	P18754	421 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ARL4D	P49703	201 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	AKIRIN2	Q53H80	203 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	C1orf189	Q5VU69	101 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	EIF5AL1	Q6IS14	154 aa	Known RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	LANCL3	Q6ZV70	420 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838		Q7L0L9	218 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	PEG10	Q86TG7	708 aa	Known RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SKA3	Q8IX90	412 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	POC1A	Q8NBT0	407 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	DMBX1	Q8NFW5	382 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OR56B1	Q8NGI3	324 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	NECAB3	Q96P71	396 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	OCSTAMP	Q9BR26	566 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	ZNF304	Q9HCX3	659 aa		11.44	□□□□□ -0.58
DDX11-223	ENST00000542838	SHISA8	B8ZZ34	492 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838		H3BMH7	237 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	SFTPB	P07988	381 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	CSNK2A1	P68400	391 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	RBM39	Q14498	530 aa	Known RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	GKN2	Q86XP6	184 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	CSNK2A3	Q8NEV1	391 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	OR2AJ1	Q8NGZ0	328 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	ST8SIA1	Q92185	356 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	DDIT4L	Q96D03	193 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	MVB12A	Q96EY5	273 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	ZDHHC12	Q96GR4	267 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	VN1R1	Q9GZP7	353 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	UCK1	Q9HA47	277 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	NPIPB13	A6NJU9	1138 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	NPIPB4	C9JG80	1138 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	IFNA4	P05014	189 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	APOBEC1	P41238	236 aa	Known RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	DHPS	P49366	369 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	SMAD2	Q15796	467 aa	Known RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	MISP	Q8IVT2	679 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	MAFIP	Q8WZ33	124 aa		11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	URM1	Q9BTM9	101 aa	Known RBP	11.43	□□□□□ -0.58
DDX11-223	ENST00000542838	GPR84	Q9NQS5	396 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms