RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SGK3Q96BR1 496 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 ZC3HAV1LQ96H79 300 aaKnown RBP24.05■■□□□ 1.44
CCM2-218ENST00000541586 HCFC1P51610 2035 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 GCN1Q92616 2671 aaKnown RBP24.04■■□□□ 1.44
CCM2-218ENST00000541586 PAHP00439 452 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 GNALP38405 381 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 UBE2NP61088 152 aaKnown RBP24.04■■□□□ 1.44
CCM2-218ENST00000541586 SPANXN2Q5MJ10 180 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 HES5Q5TA89 166 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 C1orf162Q8NEQ5 155 aaPredicted RBP24.04■■□□□ 1.44
CCM2-218ENST00000541586 OR14K1Q8NGZ2 314 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 BOD1Q96IK1 185 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 A0A0B4J203 849 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 C5orf49A4QMS7 147 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 CCL2P13500 99 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 ZNF12P17014 697 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 ZNF20P17024 532 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 HOXC12P31275 282 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 PSMD7P51665 324 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 C22orf34Q6ZV56 151 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 OR51A2Q8NGJ7 313 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 ZNF75AQ96N20 296 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 WFIKKN1Q96NZ8 548 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 C1QTNF5Q9BXJ0 243 aa24.04■■□□□ 1.44
CCM2-218ENST00000541586 KLF2Q9Y5W3 355 aaPredicted RBP24.04■■□□□ 1.44
CCM2-218ENST00000541586 LRRK2Q5S007 2527 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 TUBAL3A6NHL2 446 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 CCNOP22674 350 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 ZNF45Q02386 682 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 Q6ZSR3 168 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 OR2AE1Q8NHA4 323 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 TRMT10AQ8TBZ6 339 aaKnown RBP24.03■■□□□ 1.44
CCM2-218ENST00000541586 POM121L2Q96KW2 1035 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 ABRACLQ9P1F3 81 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 NDRG3Q9UGV2 375 aa24.03■■□□□ 1.44
CCM2-218ENST00000541586 SPTAN1Q13813 2472 aaKnown RBP24.02■■□□□ 1.44
CCM2-218ENST00000541586 DHRS3O75911 302 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 SNRPBP14678 240 aaKnown RBP24.02■■□□□ 1.44
CCM2-218ENST00000541586 DDOSTP39656 456 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 COLCA1Q6ZS62 124 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 OR5D14Q8NGL3 314 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 MS4A3Q96HJ5 214 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 REEP6Q96HR9 211 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 V9GYS6 101 aa24.02■■□□□ 1.44
CCM2-218ENST00000541586 OR5H1A6NKK0 313 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 HOXB1P14653 301 aaPredicted RBP24.01■■□□□ 1.43
CCM2-218ENST00000541586 DIRAS2Q96HU8 199 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 C1QTNF6Q9BXI9 259 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 PLEKHA1Q9HB21 404 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 TMEM127O75204 238 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 SERPINA5P05154 406 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 SORDQ00796 357 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 SPOCK1Q08629 439 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 TIMM23BQ5SRD1 257 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 GLYATL3Q5SZD4 288 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 SAMD12Q8N8I0 201 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 MUCL1Q96DR8 90 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 V9GYH0 126 aa24.01■■□□□ 1.43
CCM2-218ENST00000541586 APLNRP35414 380 aa24■■□□□ 1.43
CCM2-218ENST00000541586 PPP5CP53041 499 aa24■■□□□ 1.43
CCM2-218ENST00000541586 CLDN12P56749 244 aa24■■□□□ 1.43
CCM2-218ENST00000541586 TAB1Q15750 504 aa24■■□□□ 1.43
CCM2-218ENST00000541586 ZNF529Q6P280 563 aa24■■□□□ 1.43
CCM2-218ENST00000541586 WDR31Q8NA23 367 aa24■■□□□ 1.43
CCM2-218ENST00000541586 CCDC54Q8NEL0 328 aa24■■□□□ 1.43
CCM2-218ENST00000541586 OR5H6Q8NGV6 325 aa24■■□□□ 1.43
CCM2-218ENST00000541586 ZNF671Q8TAW3 534 aa24■■□□□ 1.43
CCM2-218ENST00000541586 LIN7BQ9HAP6 207 aa24■■□□□ 1.43
CCM2-218ENST00000541586 LOC390937A0A1W2PQ73 354 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 MEGF11A6BM72 1044 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 MTRF1O75570 445 aaKnown RBP23.99■■□□□ 1.43
CCM2-218ENST00000541586 CD40LGP29965 261 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 OR1M1Q8NGA1 313 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 OR13C9Q8NGT0 318 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 RGCCQ9H4X1 137 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 ZNF391Q9UJN7 358 aa23.99■■□□□ 1.43
CCM2-218ENST00000541586 ZNF14P17017 642 aaPredicted RBP23.98■■□□□ 1.43
CCM2-218ENST00000541586 ELK1P19419 428 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 CFPP27918 469 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 KIR2DL3P43628 341 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 GLT8D1Q68CQ7 371 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 WFDC8Q8IUA0 241 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 C17orf78Q8N4C9 275 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 SLC30A7Q8NEW0 376 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 LGALS14Q8TCE9 139 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 ADAM30Q9UKF2 790 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 SPATA2Q9UM82 520 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 PRR14LQ5THK1 2151 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 CD37P11049 281 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 RAB3AP20336 220 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 BDKRB2P30411 391 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 EVX1P49640 407 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 ZNF92Q03936 586 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 PPA1Q15181 289 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 C16orf87Q6PH81 154 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 CNIH2Q6PI25 160 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 MEX3BQ6ZN04 569 aaKnown RBP23.98■■□□□ 1.43
CCM2-218ENST00000541586 PGAP1Q75T13 922 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 USB1Q9BQ65 265 aaKnown RBP23.98■■□□□ 1.43
CCM2-218ENST00000541586 OR10A4Q9H209 315 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms