RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 COMMD3Q9UBI1 195 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 PIGLQ9Y2B2 252 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 A6NIN4 97 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 SULT1B1O43704 296 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 AGFG2O95081 481 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF35P13682 527 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 TUBG1P23258 451 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 CHRNB4P30926 498 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 GSK3AP49840 483 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 GK2Q14410 553 aaPredicted RBP15.32■□□□□ 0.04
CLIP1-215ENST00000541108 PPA1Q15181 289 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 MYPOPQ86VE0 399 aaPredicted RBP15.32■□□□□ 0.04
CLIP1-215ENST00000541108 OR51A2Q8NGJ7 313 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ZFAND2BQ8WV99 257 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 CEP19Q96LK0 163 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 CMTM3Q96MX0 182 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 WDR12Q9GZL7 423 aaKnown RBP15.32■□□□□ 0.04
CLIP1-215ENST00000541108 TUBG2Q9NRH3 451 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 COQ3Q9NZJ6 369 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 STARD10Q9Y365 291 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 MYO7BQ6PIF6 2116 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 A0A1B0GUH1 482 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ALDOBP05062 364 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 SLC2A2P11168 524 aaPredicted RBP15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ACKR3P25106 362 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 TNFSF8P32971 234 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 RANBP1P43487 201 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF45Q02386 682 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 SPOCK1Q08629 439 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 TNK1Q13470 666 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 TAB1Q15750 504 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 KRT74Q7RTS7 529 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 CCDC190Q86UF4 302 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 LYPD6Q86Y78 171 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 C1QTNF6Q9BXI9 259 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 ABCB9Q9NP78 766 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 SPATA2Q9UM82 520 aa15.32■□□□□ 0.04
CLIP1-215ENST00000541108 USP24Q9UPU5 2620 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 SLC17A2O00624 439 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 CECR9P0C854 216 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 CALCBP10092 127 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 FAHP16930 419 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 PEX19P40855 299 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 UCP2P55851 309 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF846Q147U1 533 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 FBXL19-AS1Q494R0 122 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 SPANXN2Q5MJ10 180 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 TMEM42Q69YG0 159 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 FAM166AQ6J272 317 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 GALNT11Q8NCW6 608 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 DNAAF1Q8NEP3 725 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 OR13C9Q8NGT0 318 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 UQCC2Q9BRT2 126 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 PLGRKTQ9HBL7 147 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 STEAP1Q9UHE8 339 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 ADAM30Q9UKF2 790 aa15.31■□□□□ 0.04
CLIP1-215ENST00000541108 PCNX1Q96RV3 2341 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 IGHV1-18A0A0C4DH31 117 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 MAGEB3O15480 346 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 SMPD2O60906 423 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 BMP4P12644 408 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 RAD52P43351 418 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 ASCL1P50553 236 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 CAPZA1P52907 286 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 C1orf100Q5SVJ3 147 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 HES5Q5TA89 166 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 MRPL21Q7Z2W9 205 aaKnown RBP15.3■□□□□ 0.04
CLIP1-215ENST00000541108 LAX1Q8IWV1 398 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 FTMTQ8N4E7 242 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF671Q8TAW3 534 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 TRMT10AQ8TBZ6 339 aaKnown RBP15.3■□□□□ 0.04
CLIP1-215ENST00000541108 TECTBQ96PL2 329 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 SORCS2Q96PQ0 1159 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 MIXL1Q9H2W2 232 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 METTL17Q9H7H0 456 aaPredicted RBP15.3■□□□□ 0.04
CLIP1-215ENST00000541108 LIN7BQ9HAP6 207 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 CACNA1BQ00975 2339 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 COL6A6A6NMZ7 2263 aa15.3■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF816-ZNF321PA0A0X1KG74 233 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 PPP3CBP16298 524 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 HTR2CP28335 458 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 CCKARP32238 428 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 CLVS2Q5SYC1 327 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 MTFR2Q6P444 385 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 FBXW12Q6X9E4 464 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 RFPL4BQ6ZWI9 263 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 FJX1Q86VR8 437 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 LRRC28Q86X40 367 aaPredicted RBP15.29■□□□□ 0.04
CLIP1-215ENST00000541108 OR5AS1Q8N127 324 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 MFSD4AQ8N468 514 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 CSNK2A3Q8NEV1 391 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 OR6M1Q8NGM8 313 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 LILRB4Q8NHJ6 448 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 NEK6Q9HC98 313 aa15.29■□□□□ 0.04
CLIP1-215ENST00000541108 IGKV1-9A0A0C4DH69 117 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 PAHP00439 452 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 PRF1P14222 555 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 PPP1CBP62140 327 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 RIN1Q13671 783 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 UBE2V2Q15819 145 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms