RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-211ENST00000539843 FIP1L1Q6UN15 594 aaKnown RBP12.71□□□□□ -0.37
UBE3B-211ENST00000539843 TREML4Q6UXN2 200 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 SHFQ7M4L6 423 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 DPY19L4Q7Z388 723 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 DHFR2Q86XF0 187 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-211ENST00000539843 CMTM4Q8IZR5 234 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 ST8SIA4Q92187 359 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 REEP6Q96HR9 211 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 LRGUKQ96M69 825 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 WDFY2Q96P53 400 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 INTS14Q96SY0 518 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 OR10A2Q9H208 303 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 RNPEPL1Q9HAU8 725 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 TNFRSF19Q9NS68 423 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 ARL8BQ9NVJ2 186 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 BTBD17A6NE02 478 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 FAM181BA6NEQ2 426 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 SOX14O95416 240 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 GYPBP06028 91 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 MUC1P15941 1255 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-211ENST00000539843 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-211ENST00000539843 RAG2P55895 527 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 IL5RAQ01344 420 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 PCK2Q16822 640 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 MICAQ29983 383 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 GFOD2Q3B7J2 385 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 OR2T5Q6IEZ7 315 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 Q6YL49 198 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 ERI1Q8IV48 349 aaKnown RBP12.7□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF511Q8NB15 262 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 OR2T29Q8NH02 315 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 DDOQ99489 341 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
UBE3B-211ENST00000539843 TEX12Q9BXU0 123 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 ACOXLQ9NUZ1 547 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 ARMC1Q9NVT9 282 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 FAM96BQ9Y3D0 163 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 U3KQV3 271 aa12.7□□□□□ -0.38
UBE3B-211ENST00000539843 DHRS12A0PJE2 317 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 DVL1O14640 695 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 TNFRSF13BO14836 293 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-211ENST00000539843 GPR37O15354 613 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 WIPF1O43516 503 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 SFTPBP07988 381 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 H2BFMP0C1H6 154 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 ATP6V1B2P21281 511 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 OMGP23515 440 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 GSTT1P30711 240 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 TEX36Q5VZQ5 186 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF770Q6IQ21 691 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-211ENST00000539843 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF826PQ6ZT77 177 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 FAM57BQ71RH2 274 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 BTN2A1Q7KYR7 527 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 SLC16A9Q7RTY1 509 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 GCSAMQ8N6F7 178 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 OR8D4Q8NGM9 314 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 LHX4Q969G2 390 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 SPSB4Q96A44 273 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 C12orf43Q96C57 262 aaKnown RBP12.69□□□□□ -0.38
UBE3B-211ENST00000539843 PGAM5Q96HS1 289 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 RTL8AQ9BWD3 113 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 KAAG1Q9UBP8 84 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 DNAJB11Q9UBS4 358 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
UBE3B-211ENST00000539843 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 A0A1B0GVI7 797 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 B2RBV5 119 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 GNGT2O14610 69 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 NDUFB3O43676 98 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 IGHV1-69P01742 117 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 MELTFP08582 738 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 HOXB6P17509 224 aaKnown RBP12.68□□□□□ -0.38
UBE3B-211ENST00000539843 EEF1B2P24534 225 aaKnown RBP12.68□□□□□ -0.38
UBE3B-211ENST00000539843 LRRC10Q5BKY1 277 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 LCN8Q6JVE9 175 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 PAPD5Q8NDF8 572 aaKnown RBP12.68□□□□□ -0.38
UBE3B-211ENST00000539843 OR1M1Q8NGA1 313 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 OR10G2Q8NGC3 310 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 OR4Q3Q8NH05 313 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms