RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SPERTQ8NA61 448 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 PXT1Q8NFP0 134 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 RAB3CQ96E17 227 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 SPACA9Q96E40 222 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 RRNAD1Q96FB5 475 aaKnown RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 PRRT1Q99946 306 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 HDHD3Q9BSH5 251 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 ADAT1Q9BUB4 502 aaKnown RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 COMMD9Q9P000 198 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 KANTRA0A1W2PQU2 76 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 MELTFP08582 738 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CCL4P13236 92 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 RAB6AP20340 208 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 SLC25A47Q6Q0C1 308 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CRIP3Q6Q6R5 217 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 GALNTL5Q7Z4T8 443 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 FOXRED2Q8IWF2 684 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 PPA2Q9H2U2 334 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 C5orf66Q9H5L9 145 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CHCHD2Q9Y6H1 151 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 IGKV1D-8A0A087WSZ0 117 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 MSGN1A6NI15 193 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 D6RAR5 112 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 STMND1H3BQB6 276 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 STARP49675 285 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 DEFA5Q01523 94 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ACY1Q03154 408 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 CLVS2Q5SYC1 327 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF468Q5VIY5 522 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 OR2AE1Q8NHA4 323 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ELP5Q8TE02 316 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 MITD1Q8WV92 249 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 FBXW5Q969U6 566 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 GPN3Q9UHW5 284 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 NCOR1O75376 2440 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 CFAP47Q6ZTR5 3102 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 H0YIZ8 118 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 MGMTP16455 207 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ARFRP1Q13795 201 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 MEF2DQ14814 521 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 RAET1LQ5VY80 246 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF529Q6P280 563 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 PPP1R3BQ86XI6 285 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 KMT5CQ86Y97 462 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 SPEM1Q8N4L4 309 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 KCNRGQ8N5I3 272 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 PNLDC1Q8NA58 520 aaKnown RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 SLCO5A1Q9H2Y9 848 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 BARX1Q9HBU1 254 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-210ENST00000539599 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 SESN1Q9Y6P5 492 aa12.38□□□□□ -0.43
UBE3B-210ENST00000539599 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 GLRA1P23415 457 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 CALCRP30988 508 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 CXCL12P48061 93 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 UBE2V2Q15819 145 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 OR51F2Q8NH61 342 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 PHB2Q99623 299 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 RASL12Q9NYN1 266 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 TAS2R3Q9NYW6 316 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 FAM74A7A6NL05 159 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
UBE3B-210ENST00000539599 SUMO3P55854 103 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-210ENST00000539599 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
UBE3B-210ENST00000539599 FAM74A3Q4VXF1 159 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 C20orf196Q8IYI0 205 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 TMEM185AQ8NFB2 350 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 BPIFCQ8NFQ6 507 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 OR51T1Q8NGJ9 327 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 OR5L2Q8NGL0 311 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 OR1S2Q8NGQ3 325 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 DYRK2Q92630 601 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 PGAM5Q96HS1 289 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
UBE3B-210ENST00000539599 MRPS17Q9Y2R5 130 aaKnown RBP12.37□□□□□ -0.43
UBE3B-210ENST00000539599 A0A0G2JMM0 328 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 A0A1W2PPB8 328 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 TUBAL3A6NHL2 446 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 KIR3DP1A8MWS1 328 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 BCL2L11O43521 198 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms