RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZNF468Q5VIY5 522 aaPredicted RBP13.08□□□□□ -0.32
CACNB1-206ENST00000539338 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
CACNB1-206ENST00000539338 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
CACNB1-206ENST00000539338 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
CACNB1-206ENST00000539338 PRELID3BQ9Y3B1 194 aa13.08□□□□□ -0.32
CACNB1-206ENST00000539338 ADRB1P08588 477 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 GSTP1P09211 210 aaKnown RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 LYG2Q86SG7 212 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 SIRT3Q9NTG7 399 aaPredicted RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 MCM3APO60318 1980 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 SIRPB1O00241 398 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 WDR1O75083 606 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 OR5H8P0DN80 308 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 RPL12P30050 165 aaKnown RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 Q6ZRG5 221 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 C11orf40Q8WZ69 217 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 RTL8AQ9BWD3 113 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 SLC25A32Q9H2D1 315 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 PATZ1Q9HBE1 687 aaKnown RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF724A8MTY0 619 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 SLC17A2O00624 439 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 WNT1P04628 370 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 MGMTP16455 207 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 FAHP16930 419 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 PCBP3P57721 371 aaKnown RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 TMEM268Q5VZI3 342 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 C10orf111Q8N326 155 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 TINAGL1Q9GZM7 467 aaPredicted RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 MDFIC2A0A1B0GVS7 189 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 JTBO76095 146 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF117Q03924 483 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF808Q8N4W9 903 aaPredicted RBP13.07□□□□□ -0.32
CACNB1-206ENST00000539338 OR8D4Q8NGM9 314 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
CACNB1-206ENST00000539338 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 OR6C68A6NDL8 312 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 CYB5BO43169 146 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 SSSCA1O60232 199 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 LGALS4P56470 323 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 HAGHQ16775 308 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 OR2A5Q96R48 311 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 CDC42EP2O14613 210 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 ZFPL1O95159 310 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 PSMB3P49720 205 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 CLDN15P56746 228 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 FMODQ06828 376 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 OR8G1Q15617 311 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 C17orf47Q8NEP4 570 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 PRSS23O95084 383 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 HLA-DOBP13765 273 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 ABCD3P28288 659 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 WDR38Q5JTN6 314 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 FBXL14Q8N1E6 418 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 ADGRL4Q9HBW9 690 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 FAM90A27PA6NNH2 459 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 TAAR5O14804 337 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 DHHO43323 396 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 PLPP2O43688 288 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.06□□□□□ -0.32
CACNB1-206ENST00000539338 GUSBP11Q6P575 273 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 VN1R4Q7Z5H5 301 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
CACNB1-206ENST00000539338 SPRY1O43609 319 aaPredicted RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 FZD2Q14332 565 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 SLC25A26Q70HW3 274 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 VASH2Q86V25 355 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 CARFQ8N187 725 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 RBMXL3Q8N7X1 1067 aaKnown RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 OR4D9Q8NGE8 314 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 NTN1O95631 604 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 OR8U8P0C7N1 319 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 DRD3P35462 400 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF85Q03923 595 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 C8orf82Q6P1X6 216 aaPredicted RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ANKRD16Q6P6B7 361 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 TEX261Q6UWH6 196 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 SLC35G3Q8N808 338 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 WDFY2Q96P53 400 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 U3KQ87 197 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 DCTN6O00399 190 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 SSPNQ14714 243 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms