RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DHRS3O75911 302 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CHRM2P08172 466 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 HCKP08631 526 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CXCL2P19875 107 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CASRP41180 1078 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF84P51523 738 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CLDN15P56746 228 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CARD18P57730 90 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ECH1Q13011 328 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 MPPED2Q15777 294 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 GRK1Q15835 563 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CCDC157Q569K6 752 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 TNFAIP8L1Q8WVP5 186 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-208ENST00000538333 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-208ENST00000538333 KCNK7Q9Y2U2 307 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 PINLYPA6NC86 204 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 M0R135 149 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 GOSR2O14653 212 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 DBHP09172 617 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 JMJD7P0C870 316 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF35P13682 527 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 SLC6A9P48067 706 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CYB561P49447 251 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 OC90Q02509 493 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 FOXO1Q12778 655 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 RNASE10Q5GAN6 216 aaKnown RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 PLAC9Q5JTB6 97 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 PLA2G2CQ5R387 149 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ABLIM2Q6H8Q1 611 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 OR52W1Q6IF63 320 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF799Q96GE5 643 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 PRRT1Q99946 306 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 PLEK2Q9NYT0 353 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 FOXJ2Q9P0K8 574 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ANAPC10Q9UM13 185 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 A0A1W2PP11 408 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CXCL13O43927 109 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 RGS11O94810 467 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 MPIG6BO95866 241 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CD59P13987 128 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CRYGSP22914 178 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 THBS4P35443 961 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ALDH3B1P43353 468 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 TMEM50BP56557 158 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 EXOSC2Q13868 293 aaKnown RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ZMYND11Q15326 602 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CD163Q86VB7 1156 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 GPR137CQ8N3F9 429 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 OR10D3Q8NH80 312 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 ELMOD3Q96FG2 381 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 SFXN2Q96NB2 322 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 TMEM59Q9BXS4 323 aa12.29□□□□□ -0.44
LIMK1-208ENST00000538333 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-208ENST00000538333 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CCDC187A0A096LP49 1063 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 MCRIP1C9JLW8 97 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 F5H5P2 479 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 SOCS1O15524 211 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CSN2P05814 226 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
LIMK1-208ENST00000538333 UBBP0CG47 229 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 NFYAP23511 347 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-208ENST00000538333 STARP49675 285 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 GFRA1P56159 465 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CXADRP78310 365 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 KISS1Q15726 138 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 UBE2V2Q15819 145 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 DMRTC1Q5HYR2 192 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 LY6G6FQ5SQ64 297 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 OR2V1Q8NHB1 315 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 BANF2Q9H503 90 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 RPS10-NUDT3A0A1W2PQS6 291 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 LINC00862A6NCI5 91 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 HMSDA8MTL9 139 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 M0R233 179 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 SYNGR3O43761 229 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 APOC1P02654 83 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 NAT2P11245 290 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
LIMK1-208ENST00000538333 HRH1P35367 487 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CD96P40200 585 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 DHRS2Q13268 280 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 OPCMLQ14982 345 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 C17orf107Q6ZR85 190 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 C1QL2Q7Z5L3 287 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 OR8H3Q8N146 312 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms