RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KRT8P05787 483 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 TUBG1P23258 451 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 C21orf33P30042 268 aaPredicted RBP11.07□□□□□ -0.64
CHFR-216ENST00000538235 ATP6V1E1P36543 226 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 ACTC1P68032 377 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 ACTA1P68133 377 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 RIN1Q13671 783 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 GALEQ14376 348 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 C6orf141Q5SZD1 244 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 PRAMEF6Q5VXH4 476 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 SHEQ5VZ18 495 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 Q6ZSR3 168 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 C1orf174Q8IYL3 243 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 RDH10Q8IZV5 341 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 PLPP7Q8NBV4 271 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 BPIFB6Q8NFQ5 453 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 OR5L1Q8NGL2 311 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 UBASH3BQ8TF42 649 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
CHFR-216ENST00000538235 MEGF10Q96KG7 1140 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 Q96MT0 163 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 COG8Q96MW5 612 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 BPESC1Q9GZL8 116 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 OR10A2Q9H208 303 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 TUBG2Q9NRH3 451 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 ZNF275Q9NSD4 429 aaPredicted RBP11.07□□□□□ -0.64
CHFR-216ENST00000538235 PLCXD1Q9NUJ7 323 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 NKIRAS2Q9NYR9 191 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 FRRS1LQ9P0K9 344 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
CHFR-216ENST00000538235 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
CHFR-216ENST00000538235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■■□ 20.3
CHFR-216ENST00000538235 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 A0A0U1RQV5 110 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 A6NIN4 97 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 OR4C45A6NMZ5 311 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 J3QLW9 94 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 SULT1C4O75897 302 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 PIPP12273 146 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 FAHP16930 419 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ZNF19P17023 458 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 CCL1P22362 96 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 IL2RGP31785 369 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 MALLQ13021 153 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 MPPED2Q15777 294 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ZNF829Q3KNS6 432 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 BCL2L15Q5TBC7 163 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 FDX2Q6P4F2 183 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 UNQ6126/PRO20091Q6UXV3 157 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ZNF786Q8N393 782 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 OR14K1Q8NGZ2 314 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 OR2G2Q8NGZ5 317 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ZNF420Q8TAQ5 688 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 RPS4Y2Q8TD47 263 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 NEU4Q8WWR8 484 aaPredicted RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 COX4I2Q96KJ9 171 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 CNBD2Q96M20 576 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 OR2V2Q96R30 315 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ADAT1Q9BUB4 502 aaKnown RBP11.06□□□□□ -0.64
CHFR-216ENST00000538235 RAB1BQ9H0U4 201 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 MS4A5Q9H3V2 200 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 GTF2A1LQ9UNN4 478 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 ABCA1O95477 2261 aa11.06□□□□□ -0.64
CHFR-216ENST00000538235 LOC107986453A0A1B0GWG9 222 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 GGT3PA6NGU5 568 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 GIFP27352 417 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 THBS2P35442 1172 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 SLC35A2P78381 396 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 ST3GAL4Q11206 333 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 FAM209AQ5JX71 171 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 FAM201AQ5SY85 155 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 ASPHD2Q6ICH7 369 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 KRT74Q7RTS7 529 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 RNF144BQ7Z419 303 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 SYS1Q8N2H4 156 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 SAP30LQ9HAJ7 183 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 BARX1Q9HBU1 254 aaPredicted RBP11.05□□□□□ -0.64
CHFR-216ENST00000538235 ERVK-18Q9QC07 812 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 CGGBP1Q9UFW8 167 aaPredicted RBP11.05□□□□□ -0.64
CHFR-216ENST00000538235 EDARQ9UNE0 448 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 SNX5Q9Y5X3 404 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 V9GYS6 101 aa11.05□□□□□ -0.64
CHFR-216ENST00000538235 CSPG4Q6UVK1 2322 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 PLSCR5A0PG75 271 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 FADS2O95864 444 aaKnown RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 APOC1P02654 83 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 CRYBB2P43320 205 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 SELENOVP59797 346 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 CSNK2BP67870 215 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 IRF3Q14653 427 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms