RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CYC1	P08574	325 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR5H8	P0DN80	308 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	ZNF32	P17041	273 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SLC25A1	P53007	311 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	TMPRSS3	P57727	454 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RAE1	P78406	368 aa	Known RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	C2orf76	Q3KRA6	126 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	FAM58A	Q8N1B3	248 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	ARHGEF39	Q8N4T4	335 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR13C8	Q8NGS7	320 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SLC25A46	Q96AG3	418 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	LIN37	Q96GY3	246 aa	Predicted RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	C20orf85	Q9H1P6	137 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	FBXO34	Q9NWN3	711 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	PCOLCE2	Q9UKZ9	415 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	LAMA4	Q16363	1823 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RREB1	Q92766	1687 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CCL21	O00585	134 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	HPN	P05981	417 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	HOXB3	P14651	431 aa	Predicted RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	PSMB3	P49720	205 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	TAS2R45	P59539	299 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	PRSS45	Q7RTY3	260 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	AMER3	Q8N944	861 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	BSCL2	Q96G97	398 aa	Predicted RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	POFUT1	Q9H488	388 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	TAAR3P	Q9P1P4	343 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SSTR2	P30874	369 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	GALNS	P34059	522 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RPS19	P39019	145 aa	Known RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	ID4	P47928	161 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SLC35A2	P78381	396 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CREB3L2	Q70SY1	520 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SPNS2	Q8IVW8	549 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	EID2B	Q96D98	161 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	GPATCH2	Q9NW75	528 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR5G3	P0C626	314 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	JUNB	P17275	347 aa	Predicted RBP	14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	PPT1	P50897	306 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RELA	Q04206	551 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	STAC2	Q6ZMT1	411 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SPRED2	Q7Z698	418 aa		14.1	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SERTM1	A2A2V5	107 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CD160	O95971	181 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	STARD6	P59095	220 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	UBE2G1	P62253	170 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	ZNF141	Q15928	474 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	C17orf107	Q6ZR85	190 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	BTF3L4	Q96K17	158 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	HLA-H	P01893	362 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	FUT3	P21217	361 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CCR6	P51684	374 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	MC2R	Q01718	297 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CYSLTR2	Q9NS75	346 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	LRP12	Q9Y561	859 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR2M5	A3KFT3	312 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	IFITM5	A6NNB3	132 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SPINT1	O43278	529 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	UBE2I	P63279	158 aa	Known RBP	14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	TESK1	Q15569	626 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR10P1	Q8NGE3	313 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	MCHR2	Q969V1	340 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	NDFIP1	Q9BT67	221 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SPRY1	O43609	319 aa	Predicted RBP	14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	TFAP2A	P05549	437 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	MGST1	P10620	155 aa	Known RBP	14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CA6	P23280	308 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	CEACAM3	P40198	252 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	MAGEA5	P43359	124 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	UBE2K	P61086	200 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	PPP1CB	P62140	327 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	DHODH	Q02127	395 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	ZFP82	Q8N141	532 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	NMES1	Q9C002	83 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	UBTD1	Q9HAC8	227 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	FBXO8	Q9NRD0	319 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RNF150	Q9ULK6	438 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	FZR1	Q9UM11	496 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	RNF24	Q9Y225	148 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SMCHD1	A6NHR9	2005 aa		14.09	□□□□□ -0.15
NCAPD3-213	ENST00000534532	IGHV4-34	P06331	123 aa		14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SNRNP70	P08621	437 aa	Known RBP	14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	BPIFB3	P59826	476 aa		14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR5D13	Q8NGL4	314 aa		14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	OR10R2	Q8NGX6	335 aa		14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	GAL3ST2	Q9H3Q3	398 aa		14.08	□□□□□ -0.15
NCAPD3-213	ENST00000534532	SNAPIN	O95295	136 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GP1BA	P07359	652 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SPANXN5	Q5MJ07	72 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF774	Q6NX45	483 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FAHD1	Q6P587	224 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF486	Q96H40	463 aa	Predicted RBP	14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SF3B5	Q9BWJ5	86 aa	Known RBP	14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SAMD10	Q9BYL1	202 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SERPINE3	A8MV23	424 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SDCBP	O00560	298 aa	Predicted RBP	14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SP9	P0CG40	484 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GAB4	Q2WGN9	574 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RNF165	Q6ZSG1	346 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ADPRHL1	Q8NDY3	354 aa		14.08	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms