RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 IL24Q13007 206 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 IL18R1Q13478 541 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 TPD52L1Q16890 204 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 TATDN3Q17R31 274 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 MAJINQ3KP22 176 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 GGTA1PQ4G0N0 100 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 TTC23LQ6PF05 361 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 BHLHA15Q7RTS1 189 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 CEACAM19Q7Z692 300 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 C1orf174Q8IYL3 243 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF645Q8N7E2 425 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 OR10G3Q8NGC4 313 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 OR5T3Q8NGG3 340 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 FRZBQ92765 325 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 C9orf85Q96MD7 179 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 SOSTQ9BQB4 213 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 ELOVL3Q9HB03 270 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 MRPS30Q9NP92 439 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 PNO1Q9NRX1 252 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 MRPL39Q9NYK5 338 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 DHRS4-AS1Q9P1J3 65 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 MRPS33Q9Y291 106 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 SLC22A7Q9Y694 548 aa3.34□□□□□ -1.87
ECHDC1-223ENST00000534442 IGKV1-8A0A0C4DH67 115 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 A0A1W2PPV9 198 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ACOD1A6NK06 481 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 PSMD12O00232 456 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 SAP18O00422 153 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 FTH1P02794 183 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ERCC1P07992 297 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 CNTFRP26992 372 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 FOXA1P55317 472 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 CTBP2P56545 445 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 LCN2P80188 198 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ASPHQ12797 758 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 DPYSL3Q14195 570 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 BCL2A1Q16548 175 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 SYPL1Q16563 259 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 CNPY1Q3B7I2 92 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 LGSNQ5TDP6 509 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF57Q68EA5 555 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 TIGD3Q6B0B8 471 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 NIPAL1Q6NVV3 410 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 GLT6D1Q7Z4J2 308 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 IFNEQ86WN2 208 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 PSTKQ8IV42 348 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 CLDN19Q8N6F1 224 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 MORN4Q8NDC4 146 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 CNIH3Q8TBE1 160 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 FNDC9Q8TBE3 224 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ELMO1Q92556 727 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 RAD51AP1Q96B01 352 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 MUCL1Q96DR8 90 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 RILPQ96NA2 401 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 HBEGFQ99075 208 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 SNRNP25Q9BV90 132 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 TM2D1Q9BX74 207 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 HCAR1Q9BXC0 346 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 TMEM165Q9HC07 324 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 ETNK2Q9NVF9 386 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 MMACHCQ9Y4U1 282 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 SPACA6W5XKT8 324 aa3.33□□□□□ -1.88
ECHDC1-223ENST00000534442 IGLV3-16A0A075B6K0 115 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 IGKV3D-15A0A087WSY6 115 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 KCNE1BA0A087WTH5 132 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 H0YC42 278 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TP53I11O14683 189 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 HAT1O14929 419 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 LCMT2O60294 686 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF253O75346 499 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 GCM2O75603 506 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 BCKDHAP12694 445 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 CCNCP24863 283 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 RPA3P35244 121 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 ELK3P41970 407 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 ALDH3B2P48448 385 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PPOXP50336 477 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 ARHGDIBP52566 201 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 EFNB2P52799 333 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 RPL8P62917 257 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PRDX1Q06830 199 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 RGS1Q08116 209 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 CDH17Q12864 832 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 CRMP1Q14194 572 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PON3Q15166 354 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 STK11Q15831 433 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PPP1R3AQ16821 1122 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 MICAQ29983 383 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 DCST2Q5T1A1 773 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TTC23Q5W5X9 447 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TRIM40Q6P9F5 258 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 BRD3OSQ6XYD6 125 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 VN1R4Q7Z5H5 301 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TMEM17Q86X19 198 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 GABRG1Q8N1C3 465 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms