RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PLEK2Q9NYT0 353 aa16.09■□□□□ 0.17
SMPD1-208ENST00000533123 CD2P06729 351 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 MMP7P09237 267 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-208ENST00000533123 CD79AP11912 226 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 ADORA2A-AS1P86434 159 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 PSG4Q00888 419 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 SLC36A2Q495M3 483 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 FAM57BQ71RH2 274 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 OR51A2Q8NGJ7 313 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 CCDC120Q96HB5 630 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 RNF121Q9H920 327 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 TIMM10BQ9Y5J6 103 aa16.08■□□□□ 0.16
SMPD1-208ENST00000533123 F5H5K5 113 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 DBHP09172 617 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 TALDO1P37837 337 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 PCBD1P61457 104 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 ELFN2Q5R3F8 820 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 ZNF774Q6NX45 483 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 Q8N402 240 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 PLPP7Q8NBV4 271 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 LILRB4Q8NHJ6 448 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 AKR7LQ8NHP1 331 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 KCNJ15Q99712 375 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 NOX3Q9HBY0 568 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 A0A1B0GTI1 187 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 SGCEO43556 437 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 SYT7O43581 403 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 IGFBP3P17936 291 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-208ENST00000533123 FAM27E3Q08E93 113 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 SCRN3Q0VDG4 424 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 RSPO1Q2MKA7 263 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-208ENST00000533123 GFOD2Q3B7J2 385 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 ATAD3CQ5T2N8 411 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 PRSS45Q7RTY3 260 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 SLC25A38Q96DW6 304 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 OR2H1Q9GZK4 316 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 MOB1AQ9H8S9 216 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 JKAMPQ9P055 326 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 CKLFQ9UBR5 152 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 OR5V1Q9UGF6 321 aa16.07■□□□□ 0.16
SMPD1-208ENST00000533123 RALYQ9UKM9 306 aaKnown RBP16.07■□□□□ 0.16
SMPD1-208ENST00000533123 A0A1B0GUH1 482 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 ANKRD34BA5PLL1 514 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 FAM172BPA6NC97 362 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 RAB1AP62820 205 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 UTS2BQ765I0 119 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 BHLHA15Q7RTS1 189 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-208ENST00000533123 COMMD2Q86X83 199 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 C17orf50Q8WW18 174 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 FGGYQ96C11 551 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 ADAT3Q96EY9 351 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-208ENST00000533123 ZNF275Q9NSD4 429 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-208ENST00000533123 FSTP19883 344 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 SLC6A9P48067 706 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 PITPNBP48739 271 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 PABPC1L2AQ5JQF8 200 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 IZUMO1Q8IYV9 350 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 C1orf162Q8NEQ5 155 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-208ENST00000533123 OR1J2Q8NGS2 313 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 WNT5BQ9H1J7 359 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 GPR84Q9NQS5 396 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 COQ3Q9NZJ6 369 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 FOXJ3Q9UPW0 622 aa16.06■□□□□ 0.16
SMPD1-208ENST00000533123 PTBP1P26599 531 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPD1-208ENST00000533123 CHRNB4P30926 498 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 UBE2NP61088 152 aaKnown RBP16.05■□□□□ 0.16
SMPD1-208ENST00000533123 SPOCK1Q08629 439 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 PLA2G7Q13093 441 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 RIN1Q13671 783 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 UBE2NLQ5JXB2 153 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 NRARPQ7Z6K4 114 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 CMTM4Q8IZR5 234 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 CPEB3Q8NE35 698 aaKnown RBP16.05■□□□□ 0.16
SMPD1-208ENST00000533123 ABHD1Q96SE0 405 aa16.05■□□□□ 0.16
SMPD1-208ENST00000533123 SPTBN1Q01082 2364 aaKnown RBP16.05■□□□□ 0.16
SMPD1-208ENST00000533123 A0A1B0GVI7 797 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 SYNGR3O43761 229 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 IL32P24001 234 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 GSG1Q2KHT4 349 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 SERPINA12Q8IW75 414 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 FAM71F1Q96KD3 344 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-208ENST00000533123 WACQ9BTA9 647 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 KCNK15Q9H427 330 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 B3GNT2Q9NY97 397 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 ERRFI1Q9UJM3 462 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-208ENST00000533123 ARPC4-TTLL3A0A0A6YYG9 625 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 UBL3O95164 117 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 PSMB1P20618 241 aaKnown RBP16.04■□□□□ 0.16
SMPD1-208ENST00000533123 SCN1BQ07699 218 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 RAB35Q15286 201 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 MDP1Q86V88 176 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 WDR31Q8NA23 367 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 S100PBPQ96BU1 408 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 SLC17A5Q9NRA2 495 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 CGGBP1Q9UFW8 167 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-208ENST00000533123 STEAP1Q9UHE8 339 aa16.04■□□□□ 0.16
SMPD1-208ENST00000533123 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 HOXC12P31275 282 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms