RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RNLSQ5VYX0 342 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 PRSS48Q7RTY5 328 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 MRPL21Q7Z2W9 205 aaKnown RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 STX19Q8N4C7 294 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 SVOPQ8N4V2 548 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 SPICQ8N5J4 248 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 TEX29Q8N6K0 151 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 OR10AD1Q8NGE0 317 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 ST7LQ8TDW4 575 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 RNFT2Q96EX2 444 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 INTS14Q96SY0 518 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 CNN2Q99439 309 aaKnown RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 KCNJ15Q99712 375 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 MDFIQ99750 246 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 JAM3Q9BX67 310 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 MARCH7Q9H992 704 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 LPAR2Q9HBW0 351 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 VCX3AQ9NNX9 186 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 FGF20Q9NP95 211 aaPredicted RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 TMEM100Q9NV29 134 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 CHCHD3Q9NX63 227 aaKnown RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 EXOGQ9Y2C4 368 aaKnown RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 NOP16Q9Y3C1 178 aaKnown RBP14.06□□□□□ -0.16
PKP3-209ENST00000533069 SNX5Q9Y5X3 404 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 TMEM14AQ9Y6G1 99 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 DNHD1Q96M86 4753 aa14.06□□□□□ -0.16
PKP3-209ENST00000533069 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 FBN1P35555 2871 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 PHYHO14832 338 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 XPNPEP2O43895 674 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 IGHV2-70P01814 119 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 SRP14P37108 136 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 GRB2P62993 217 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 SMN1Q16637 294 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 TMEM155Q4W5P6 130 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 RHOUQ7L0Q8 258 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 SHFQ7M4L6 423 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 NAA40Q86UY6 237 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 BHLHE23Q8NDY6 225 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 BBS1Q8NFJ9 593 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 SPRYD4Q8WW59 207 aaPredicted RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 GGHQ92820 318 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 TMEM80Q96HE8 168 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 MEGF10Q96KG7 1140 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 OPA3Q9H6K4 179 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 MED20Q9H944 212 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 GCM1Q9NP62 436 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 CENPMQ9NSP4 180 aa14.05□□□□□ -0.16
PKP3-209ENST00000533069 DIMT1Q9UNQ2 313 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 EXOSC1Q9Y3B2 195 aaKnown RBP14.05□□□□□ -0.16
PKP3-209ENST00000533069 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 MLNRO43193 412 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 PNPP00491 289 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 APOC1P02654 83 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 CDK1P06493 297 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 SBK2P0C263 348 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 OR2T7P0C7T2 308 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 MYL12AP19105 171 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 MMP16P51512 607 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 BTG1P62324 171 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 ST3GAL4Q11206 333 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 EIF2B1Q14232 305 aaKnown RBP14.04□□□□□ -0.16
PKP3-209ENST00000533069 ZNF773Q6PK81 442 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 SLC16A9Q7RTY1 509 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 ERI1Q8IV48 349 aaKnown RBP14.04□□□□□ -0.16
PKP3-209ENST00000533069 KLHL36Q8N4N3 616 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 CELF2-AS1Q8N7Q2 184 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 ZNF454Q8N9F8 522 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 TSPAN14Q8NG11 270 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 OR6N2Q8NGY6 317 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 OR2T27Q8NH04 317 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 HAVCR2Q8TDQ0 301 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 TMEM158Q8WZ71 300 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 CDCA4Q9BXL8 241 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 SLC22A4Q9H015 551 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 SP140LQ9H930 580 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 PCDHGB5Q9Y5G0 923 aa14.04□□□□□ -0.16
PKP3-209ENST00000533069 A0A0G2JMP0 313 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 A0A0X1KG70 313 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 LRRC30A6NM36 301 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 PTGES3LE9PB15 166 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 TMEM178BH3BS89 294 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 PHF1O43189 567 aaPredicted RBP14.03□□□□□ -0.16
PKP3-209ENST00000533069 PLPP2O43688 288 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 IGHA1P01876 353 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 GATA3P23771 443 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 PRKXP51817 358 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 SCGB2A2Q13296 93 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 ZNF181Q2M3W8 571 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 SNAI3Q3KNW1 292 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 AHSA2Q719I0 299 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 DPY19L4Q7Z388 723 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 BCDIN3DQ7Z5W3 292 aaKnown RBP14.03□□□□□ -0.16
PKP3-209ENST00000533069 TIGD4Q8IY51 512 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 MUC20Q8N307 709 aaPredicted RBP14.03□□□□□ -0.16
PKP3-209ENST00000533069 ACBD7Q8N6N7 88 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 OR4M2Q8NGB6 313 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 OR51G2Q8NGK0 314 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 RNF133Q8WVZ7 376 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms