RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 OR5L1Q8NGL2 311 aa14.39□□□□□ -0.11
PKP3-208ENST00000531857 FEVQ99581 238 aa14.39□□□□□ -0.11
PKP3-208ENST00000531857 DGCR6LQ9BY27 220 aa14.39□□□□□ -0.11
PKP3-208ENST00000531857 RIBC2Q9H4K1 309 aa14.39□□□□□ -0.11
PKP3-208ENST00000531857 NMNAT1Q9HAN9 279 aaPredicted RBP14.39□□□□□ -0.11
PKP3-208ENST00000531857 SNX5Q9Y5X3 404 aa14.39□□□□□ -0.11
PKP3-208ENST00000531857 A0A087WUU8 490 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 IQCF6A8MYZ5 107 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 J3QW42 95 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 M0QZ24 198 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 PHYHO14832 338 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 AHCYL1O43865 530 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 DIRAS1O95057 198 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 ATP6V1B1P15313 513 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 CRHBPP24387 322 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 RGS6P49758 472 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 LSM6P62312 80 aaKnown RBP14.38□□□□□ -0.11
PKP3-208ENST00000531857 MAB21L1Q13394 359 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 TRAM2Q15035 370 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 ZBED5Q49AG3 693 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 ASPHD2Q6ICH7 369 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 DCDC5Q6ZRR9 648 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 GLB1L2Q8IW92 636 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 HS3ST5Q8IZT8 346 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 C1orf87Q8N0U7 546 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 TRUB1Q8WWH5 349 aaKnown RBP14.38□□□□□ -0.11
PKP3-208ENST00000531857 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
PKP3-208ENST00000531857 SYT4Q9H2B2 425 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 PLCXD1Q9NUJ7 323 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 TMEM100Q9NV29 134 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 COMMD3-BMI1R4GMX3 469 aa14.38□□□□□ -0.11
PKP3-208ENST00000531857 CENPVL3A0A0U1RRI6 287 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 A0A1B0GWJ7 208 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 TNFRSF13BO14836 293 aaPredicted RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 KHDRBS3O75525 346 aaKnown RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 EEF1B2P24534 225 aaKnown RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 FPR3P25089 353 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 GGT2P36268 569 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 CFHR2P36980 270 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 PSMB10P40306 273 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 BPIFB3P59826 476 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 CDC42P60953 191 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 IL5RAQ01344 420 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 KRR1Q13601 381 aaKnown RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 ZNF730Q6ZMV8 503 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 TMPRSS11FQ6ZWK6 438 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 GPR141Q7Z602 305 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 SVOPQ8N4V2 548 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 TMEM86BQ8N661 226 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 ACOT11Q8WXI4 607 aaPredicted RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 FAM71F1Q96KD3 344 aaPredicted RBP14.37□□□□□ -0.11
PKP3-208ENST00000531857 TBX15Q96SF7 602 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 ATPIF1Q9UII2 106 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 RNF114Q9Y508 228 aa14.37□□□□□ -0.11
PKP3-208ENST00000531857 TIMM23O14925 209 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 ENSAO43768 121 aaKnown RBP14.36□□□□□ -0.11
PKP3-208ENST00000531857 FAM20BO75063 409 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 GATA4P43694 442 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 MPPED2Q15777 294 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 KCNMB1Q16558 191 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 MEP1BQ16820 701 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 CLEC12AQ5QGZ9 265 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 CORO6Q6QEF8 472 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 ZNF620Q6ZNG0 422 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 MBOAT2Q6ZWT7 520 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.36□□□□□ -0.11
PKP3-208ENST00000531857 C1QL4Q86Z23 238 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 RNF113BQ8IZP6 322 aaKnown RBP14.36□□□□□ -0.11
PKP3-208ENST00000531857 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 Q96MT0 163 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 TEX12Q9BXU0 123 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 PRRG3Q9BZD7 231 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 NUAK2Q9H093 628 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 CTSZQ9UBR2 303 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 LHFPL6Q9Y693 200 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 POMT1Q9Y6A1 747 aa14.36□□□□□ -0.11
PKP3-208ENST00000531857 ZNF879B4DU55 563 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 TOX4O94842 621 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 OSMP13725 252 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 IRF2P14316 349 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 MMP9P14780 707 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 HIST1H3AP68431 136 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 DBPQ10586 325 aaPredicted RBP14.35□□□□□ -0.11
PKP3-208ENST00000531857 HIST2H3PS2Q5TEC6 136 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 PRAMEF6Q5VXH4 476 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 ZNF770Q6IQ21 691 aaPredicted RBP14.35□□□□□ -0.11
PKP3-208ENST00000531857 COLCA1Q6ZS62 124 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 PTCHD4Q6ZW05 846 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 HIST2H3AQ71DI3 136 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 RRM2BQ7LG56 351 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 AQP11Q8NBQ7 271 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 Q8TCH9 128 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 TECTBQ96PL2 329 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 TSC22D3Q99576 134 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 COQ7Q99807 217 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 UFSP2Q9NUQ7 469 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 VSX1Q9NZR4 365 aaPredicted RBP14.35□□□□□ -0.11
PKP3-208ENST00000531857 POLR1DQ9Y2S0 133 aa14.35□□□□□ -0.11
PKP3-208ENST00000531857 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms