RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 DNTTIP1Q9H147 329 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 AKIRIN1Q9H9L7 192 aaPredicted RBP14.86□□□□□ -0.03
VPS26B-206ENST00000531741 FN3KRPQ9HA64 309 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS26B-206ENST00000531741 PILRBQ9UKJ0 227 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 SIT1Q9Y3P8 196 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 LAMA1P25391 3075 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 USP34Q70CQ2 3546 aa14.86□□□□□ -0.03
VPS26B-206ENST00000531741 IGHV1-45A0A0A0MS14 117 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 A0A0U1RQV5 110 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 KANTRA0A1W2PQU2 76 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 POM121CA8CG34 1229 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 EIF1BO60739 113 aaKnown RBP14.85□□□□□ -0.03
VPS26B-206ENST00000531741 MPIG6BO95866 241 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 MSR1P21757 451 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 CLDN17P56750 224 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 ECH1Q13011 328 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 FAM57BQ71RH2 274 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 RNF144BQ7Z419 303 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 SLC38A6Q8IZM9 456 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 TERB2Q8NHR7 220 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 TMEM41AQ96HV5 264 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 FAM71F1Q96KD3 344 aaPredicted RBP14.85□□□□□ -0.03
VPS26B-206ENST00000531741 DMRTA2Q96SC8 542 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 URM1Q9BTM9 101 aaKnown RBP14.85□□□□□ -0.03
VPS26B-206ENST00000531741 ZNF416Q9BWM5 594 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 NELFAQ9H3P2 528 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 RASL12Q9NYN1 266 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 SDK1Q7Z5N4 2213 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 IGKV1-9A0A0C4DH69 117 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 RNF222A6NCQ9 220 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 D6RAR5 112 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 MFNGO00587 321 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 BET1O15155 118 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 HCKP08631 526 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 HOXD4P09016 255 aaPredicted RBP14.85□□□□□ -0.03
VPS26B-206ENST00000531741 CSNK1A1P48729 337 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 PRAMEF20Q5VT98 475 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 PMS2CLQ68D20 193 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 CCDC54Q8NEL0 328 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 GJC3Q8NFK1 279 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 SPACA5Q96QH8 159 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 C1QTNF6Q9BXI9 259 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 SHARPINQ9H0F6 387 aa14.85□□□□□ -0.03
VPS26B-206ENST00000531741 SOCS1O15524 211 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 LIPCP11150 499 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 KLK2P20151 261 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 THBS4P35443 961 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 GUCA1AP43080 201 aaPredicted RBP14.84□□□□□ -0.03
VPS26B-206ENST00000531741 TMEM50BP56557 158 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 HIST1H3AP68431 136 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 MICBQ29980 383 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 TUSC1Q2TAM9 212 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 HIST2H3PS2Q5TEC6 136 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 HIST2H3AQ71DI3 136 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 ADAD2Q8NCV1 583 aaKnown RBP14.84□□□□□ -0.03
VPS26B-206ENST00000531741 TMEM185AQ8NFB2 350 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 M1APQ8TC57 530 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 SH2D2AQ9NP31 389 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 GLS2Q9UI32 602 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 PRUNE2Q8WUY3 3088 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 PI4KAP42356 2102 aa14.84□□□□□ -0.03
VPS26B-206ENST00000531741 LOC100509620A0A075B734 347 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 CCSO14618 274 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 PMP2P02689 132 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 ANOS1P23352 680 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 ATP1B3P54709 279 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 DSCR4P56555 118 aaPredicted RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 TAGLNQ01995 201 aaKnown RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 TMEM128Q5BJH2 165 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 MOB3CQ70IA8 216 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 PNLDC1Q8NA58 520 aaKnown RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 PXT1Q8NFP0 134 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 C10orf35Q96D05 121 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 SEC22AQ96IW7 307 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 VRK1Q99986 396 aaPredicted RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 PRO3102Q9H379 93 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 RYDENQ9NUL5 291 aaKnown RBP14.83□□□□□ -0.03
VPS26B-206ENST00000531741 GPR132Q9UNW8 380 aa14.83□□□□□ -0.03
VPS26B-206ENST00000531741 A0A0B4J2A0 478 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 UMODP07911 640 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 NAT2P11245 290 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 COX6A1P12074 109 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 LIFP15018 202 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 OTX1P32242 354 aaPredicted RBP14.83□□□□□ -0.04
VPS26B-206ENST00000531741 DLSTP36957 453 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 SUCLG1P53597 346 aaKnown RBP14.83□□□□□ -0.04
VPS26B-206ENST00000531741 ENDOGQ14249 297 aaKnown RBP14.83□□□□□ -0.04
VPS26B-206ENST00000531741 SGCAQ16586 387 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 RTN4RL2Q86UN3 420 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 TMEM123Q8N131 208 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 OR2I1PQ8NGU4 316 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 THAP6Q8TBB0 222 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 PAQR8Q8TEZ7 354 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 PP6455Q8WZ26 134 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 INTS12Q96CB8 462 aaKnown RBP14.83□□□□□ -0.04
VPS26B-206ENST00000531741 PGAM5Q96HS1 289 aa14.83□□□□□ -0.04
VPS26B-206ENST00000531741 SCGB3A2Q96PL1 93 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms