RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TMEM234Q8WY98 164 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RERGQ96A58 199 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ISOC2Q96AB3 205 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TESCQ96BS2 214 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 FAF2Q96CS3 445 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ITCHQ96J02 903 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MAGEB18Q96M61 343 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PAXXQ9BUH6 204 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PDCD10Q9BUL8 212 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SCRT1Q9BWW7 348 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 GPR174Q9BXC1 333 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 LIME1Q9H400 295 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM38AQ9H6F2 299 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 NT5DC2Q9H857 520 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 C6orf50Q9HD87 102 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RAB18Q9NP72 206 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ZDHHC4Q9NPG8 344 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 GPATCH2LQ9NWQ4 482 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PAK1IP1Q9NWT1 392 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 LHX3Q9UBR4 397 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PURGQ9UJV8 347 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 DKKL1Q9UK85 242 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 HHLA2Q9UM44 414 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ATG4BQ9Y4P1 393 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PEX16Q9Y5Y5 336 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CEP152O94986 1710 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CPSF1Q10570 1443 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SNAPC4Q5SXM2 1469 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RAPGEF2Q9Y4G8 1499 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ATP6AP2A0A1C7CYW4 349 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 A0A1W2PPE3 182 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 C9orf170A2RU37 121 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR6C6A6NF89 314 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 IGLON5A6NGN9 336 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 EFCAB7A8K855 629 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 EFCAB9A8MZ26 197 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SEC14L6B5MCN3 397 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 M0QYV0 167 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SIRPB1O00241 398 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CXCR6O00574 342 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 PLPP3O14495 311 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ZBTB5O15062 677 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 P2RX6O15547 441 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 FGF19O95750 216 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 EPOP01588 193 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CD74P04233 296 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 IFNW1P05000 195 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CD5P06127 495 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 NUDT17P0C025 328 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 METTL15P1P0C7V9 234 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF806P0C7X5 589 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CT45A8P0DMV1 189 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CT45A9P0DMV2 189 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 HLA-GP17693 338 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SERPINA2P20848 420 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 KITLGP21583 273 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 BCKDHBP21953 392 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 AK4P27144 223 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GDF1P27539 372 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 NTSP30990 170 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RPL13AP40429 203 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GCLMP48507 274 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RBP2P50120 134 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ATP1B3P54709 279 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GEMP55040 296 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RPS20P60866 119 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SNAP25P60880 206 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RANP62826 216 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SLC7A9P82251 487 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 PAX2Q02962 417 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TLE4Q04727 773 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 BIKQ13323 160 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TPBGQ13641 420 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 APOFQ13790 326 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TFDP2Q14188 446 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 MEF2DQ14814 521 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GPNMBQ14956 572 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TRIP13Q15645 432 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 KCNJ8Q15842 424 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 PSMD5Q16401 504 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ZSWIM7Q19AV6 140 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SMIM21Q3B7S5 101 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ZBED5Q49AG3 693 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 LINC01620Q4KN68 170 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CT45A2Q5DJT8 189 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 LIPKQ5VXJ0 399 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR8G2PQ6IF36 304 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RWDD4Q6NW29 188 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 FAHD1Q6P587 224 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 XKRXQ6PP77 449 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SMARCD3Q6STE5 483 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 DRAM2Q6UX65 266 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 Q71RC1 249 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GRINAQ7Z429 371 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 C5orf24Q7Z6I8 188 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 S100A7AQ86SG5 101 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 DHDDSQ86SQ9 333 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 C17orf64Q86WR6 236 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 LRRC28Q86X40 367 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms