RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CD3EP07766 207 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 ZNF20P17024 532 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 THBS4P35443 961 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 GSK3AP49840 483 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 FAM3AP98173 230 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 MXD1Q05195 221 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 TNK1Q13470 666 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 CTF1Q16619 201 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 NCMAPQ5T1S8 102 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 DOK3Q7L591 496 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 DMRTC2Q8IXT2 367 aaPredicted RBP9.15□□□□□ -0.94
SOX6-213ENST00000530378 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 NDNFQ8TB73 568 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 AKAP1Q92667 903 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX6-213ENST00000530378 CMBLQ96DG6 245 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 DACH2Q96NX9 599 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 DERL3Q96Q80 235 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 RBM38Q9H0Z9 239 aaKnown RBP9.15□□□□□ -0.94
SOX6-213ENST00000530378 SP140LQ9H930 580 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 MOV10Q9HCE1 1003 aaKnown RBP9.15□□□□□ -0.94
SOX6-213ENST00000530378 TAS2R4Q9NYW5 299 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 SSR3Q9UNL2 185 aa9.15□□□□□ -0.94
SOX6-213ENST00000530378 TRAV8-7A0A075B6U6 113 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 TRBV5-5A0A0J9YX44 114 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 SHISA3A0PJX4 238 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 H3BMQ9 156 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 NCR1O76036 304 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 GABARAPO95166 117 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 TACC2O95359 2948 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 IGLV3-1P01715 115 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 ISG15P05161 165 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 RAD52P43351 418 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 BEX5Q5H9J7 111 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 ASPHD2Q6ICH7 369 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 RGS7BPQ6MZT1 257 aaPredicted RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 ANKRD13BQ86YJ7 626 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 EGFL6Q8IUX8 553 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 OR5L1Q8NGL2 311 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 OR13C9Q8NGT0 318 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 OR14K1Q8NGZ2 314 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 KLF14Q8TD94 323 aaPredicted RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 GTF3AQ92664 365 aaKnown RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 MARS2Q96GW9 593 aaKnown RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 BCL2L14Q9BZR8 327 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 GPR173Q9NS66 373 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 MYEF2Q9P2K5 600 aaKnown RBP9.15□□□□□ -0.95
SOX6-213ENST00000530378 DUSP13Q9UII6 198 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 RNF115Q9Y4L5 304 aa9.15□□□□□ -0.95
SOX6-213ENST00000530378 IGHV3-64DA0A0J9YX35 117 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 SHISA9B4DS77 424 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 SERPINA3P01011 423 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CD1AP06126 327 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CLEC2LP0C7M8 214 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 IGFBP2P18065 325 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CCL1P22362 96 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 COL8A1P27658 744 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 TTKP33981 857 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CAV3P56539 151 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 PSG7Q13046 419 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 SPCS2Q15005 226 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 HSD17B12Q53GQ0 312 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CEP78Q5JTW2 689 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 CD200R1LQ6Q8B3 271 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 OR51A2Q8NGJ7 313 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 TMEM171Q8WVE6 324 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 C12orf43Q96C57 262 aaKnown RBP9.14□□□□□ -0.95
SOX6-213ENST00000530378 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
SOX6-213ENST00000530378 CA10Q9NS85 328 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 ZNF275Q9NSD4 429 aaPredicted RBP9.14□□□□□ -0.95
SOX6-213ENST00000530378 GPR160Q9UJ42 338 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 RHBDD3Q9Y3P4 386 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 SPEF1Q9Y4P9 236 aa9.14□□□□□ -0.95
SOX6-213ENST00000530378 NBPF19A0A087WUL8 3843 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 A6NHS1 94 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 CD300LBA8K4G0 201 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
SOX6-213ENST00000530378 ICMTO60725 284 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 SC5DO75845 299 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 MAS1P04201 325 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 CD2P06729 351 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 CD53P19397 219 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 LOXP28300 417 aaPredicted RBP9.13□□□□□ -0.95
SOX6-213ENST00000530378 GCH1P30793 250 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 SERPINB10P48595 397 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 OR8B8Q15620 311 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 TRAM1Q15629 374 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 TIMM50Q3ZCQ8 353 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 SSX8Q7RTT4 187 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 TRMT10AQ8TBZ6 339 aaKnown RBP9.13□□□□□ -0.95
SOX6-213ENST00000530378 SPSB4Q96A44 273 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 SPACA5Q96QH8 159 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 DCUN1D5Q9BTE7 237 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 PAPOLGQ9BWT3 736 aaKnown RBP9.13□□□□□ -0.95
SOX6-213ENST00000530378 TPK1Q9H3S4 243 aa9.13□□□□□ -0.95
SOX6-213ENST00000530378 RGCCQ9H4X1 137 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms