RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 FTMTQ8N4E7 242 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 TCEANCQ8N8B7 351 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 ASB17Q8WXJ9 295 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 MNTQ99583 582 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 CIB1Q99828 191 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 RBM4BQ9BQ04 359 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 ADAT1Q9BUB4 502 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 TMPRSS13Q9BYE2 586 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 MROQ9BYG7 248 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 SEMA6AQ9H2E6 1030 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 DNAJC27Q9NZQ0 273 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 RNF7Q9UBF6 113 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 OAZ3Q9UMX2 235 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 LRCH1Q9Y2L9 728 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 KLHDC2Q9Y2U9 406 aa10.16□□□□□ -0.78
TRAPPC4-209ENST00000528230 IGHV3-64DA0A0J9YX35 117 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 CEACAM18A8MTB9 384 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 PHYHO14832 338 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 FAM20BO75063 409 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 AVPP01185 164 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 RBMXP38159 391 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 GSK3AP49840 483 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 HCCSP53701 268 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 LCN2P80188 198 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 OR8B8Q15620 311 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 MPPED2Q15777 294 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 ESCO2Q56NI9 601 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 PRAMEF6Q5VXH4 476 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 LIPNQ5VXI9 398 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 C1orf229Q6ZS94 237 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 GID4Q8IVV7 300 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 ZNF679Q8IYX0 411 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 PYDC1Q8WXC3 89 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 OR8B4Q96RC9 309 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 CNN2Q99439 309 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 TMEM246Q9BRR3 403 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 GABARAPL3Q9BY60 117 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 C7orf69Q9H7B7 122 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 BRD7Q9NPI1 651 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 UFSP2Q9NUQ7 469 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 LRP12Q9Y561 859 aa10.15□□□□□ -0.78
TRAPPC4-209ENST00000528230 A0A0A6YYJ9 748 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 A0A0U1RQV5 110 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 RNF212BA8MTL3 300 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 RPS2P15880 293 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 TMED1Q13445 227 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 KPNB1Q14974 876 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 KCNJ8Q15842 424 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 DCDC5Q6ZRR9 648 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF771Q7L3S4 317 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 NLRC3Q7RTR2 1065 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 KRT74Q7RTS7 529 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 C1QL2Q7Z5L3 287 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR8S1Q8NH09 359 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 NANPQ8TBE9 248 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 NEIL1Q96FI4 390 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 IL4I1Q96RQ9 567 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 PKP2Q99959 881 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 METTL17Q9H7H0 456 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 RNPEPL1Q9HAU8 725 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 TRIM36Q9NQ86 728 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 WARS2Q9UGM6 360 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 MPC1Q9Y5U8 109 aa10.14□□□□□ -0.79
TRAPPC4-209ENST00000528230 TMEM269A0A1B0GVZ9 245 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 SAC3D1A6NKF1 404 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 H3BNX3 289 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 TRAPPC2LH3BP13 241 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 LGALS8O00214 317 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 NDUFA2O43678 99 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 TCF21O43680 179 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF205O95201 554 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 CST4P01036 141 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 LHBP01229 141 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 GRPP07492 148 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 MRPL3P09001 348 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 ATP6V1B1P15313 513 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF12P17014 697 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 POLR2IP36954 125 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 CFHR2P36980 270 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 GNALP38405 381 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 RIDAP52758 137 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 SEC61A1P61619 476 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 IL5RAQ01344 420 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 FAM201AQ5SY85 155 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 BCDIN3DQ7Z5W3 292 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 GALNT4Q8N4A0 578 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR8B12Q8NGG6 310 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR8B3Q8NGG8 313 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR8J1Q8NGP2 316 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 TRUB1Q8WWH5 349 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR8B2Q96RD0 313 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 SSBP3Q9BWW4 388 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 ADGRL4Q9HBW9 690 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 MMP26Q9NRE1 261 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 C1orf123Q9NWV4 160 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 CLN6Q9NWW5 311 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 FAM206AQ9NX38 181 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms