RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SPARCP09486 303 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 CSF1P09603 554 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 PSKH1P11801 424 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 IRF2P14316 349 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF3P17036 446 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 GRK5P34947 590 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 RBMXP38159 391 aaKnown RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 DDOSTP39656 456 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 RPS27P42677 84 aaKnown RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 KRTAP10-3P60369 221 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 GRB2P62993 217 aaKnown RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 PAX2Q02962 417 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF92Q03936 586 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 HNRNPA0Q13151 305 aaKnown RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 FAM189A2Q15884 450 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SNAI3Q3KNW1 292 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 GPR157Q5UAW9 335 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 BRD3OSQ6XYD6 125 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 Q6YL49 198 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SHFQ7M4L6 423 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 MOGAT3Q86VF5 341 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 OR11L1Q8NGX0 322 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 LINC01006Q8NI28 216 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 TEX47Q8TBZ9 253 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 CANT1Q8WVQ1 401 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SSMEM1Q8WWF3 244 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 RAB40AQ8WXH6 277 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 DYRK2Q92630 601 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SPSB4Q96A44 273 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SLAMF6Q96DU3 332 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 NEIL1Q96FI4 390 aaPredicted RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 TMEM246Q9BRR3 403 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 COPS4Q9BT78 406 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SSBP3Q9BWW4 388 aaPredicted RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 SP140LQ9H930 580 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 KIF17Q9P2E2 1029 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 PLXNB1O43157 2135 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 IGHV2-70DA0A0C4DH43 119 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 DHRS12A0PJE2 317 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 GGT3PA6NGU5 568 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 G3V4G9 280 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 GLCEO94923 617 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 SOX14O95416 240 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 GYPBP06028 91 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 CLUP10909 449 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 RPS2P15880 293 aaKnown RBP8.74□□□□□ -1.01
CPSF1-203ENST00000527916 CA6P23280 308 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 PRKXP51817 358 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 PROK1P58294 105 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 GNB2P62879 340 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 MZT1Q08AG7 82 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 TAF13Q15543 124 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 OR8G1Q15617 311 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 KCNJ8Q15842 424 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 DNAL1Q4LDG9 190 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 GLYATL3Q5SZD4 288 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
CPSF1-203ENST00000527916 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 NLRC3Q7RTR2 1065 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 TRPM8Q7Z2W7 1104 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 PAPD5Q8NDF8 572 aaKnown RBP8.74□□□□□ -1.01
CPSF1-203ENST00000527916 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 RNF133Q8WVZ7 376 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 DACT3Q96B18 629 aaPredicted RBP8.74□□□□□ -1.01
CPSF1-203ENST00000527916 CLPTM1LQ96KA5 538 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 YY1AP1Q9H869 796 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 FN3KRPQ9HA64 309 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 TRIM36Q9NQ86 728 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 FAM53CQ9NYF3 392 aa8.74□□□□□ -1.01
CPSF1-203ENST00000527916 KIR2DS1A0A191URI9 304 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 H3BN98 237 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 GNGT2O14610 69 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 GYG2O15488 501 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 NDUFA2O43678 99 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 FAM20BO75063 409 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 HMGN1P05114 100 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 MELTFP08582 738 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 OSMP13725 252 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 ANXA8P13928 327 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 PAICSP22234 425 aaKnown RBP8.73□□□□□ -1.01
CPSF1-203ENST00000527916 CFL1P23528 166 aaKnown RBP8.73□□□□□ -1.01
CPSF1-203ENST00000527916 GSTT1P30711 240 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 PSMB10P40306 273 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 NPY4RP50391 375 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 LOXL3P58215 753 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 CDK5Q00535 292 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 MPPED2Q15777 294 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 VAX1Q5SQQ9 334 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF841Q6ZN19 808 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 PRSS45Q7RTY3 260 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 TMEM179BQ7Z7N9 219 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 TIGD4Q8IY51 512 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 OR8B3Q8NGG8 313 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 OR52H1Q8NGJ2 320 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 OR6K6Q8NGW6 343 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 OR2AE1Q8NHA4 323 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 CCDC124Q96CT7 223 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms