RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
CPSF1-201ENST00000526271 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 ANKRD19PQ9H560 264 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 SRA1Q9HD15 236 aaKnown RBP11.74□□□□□ -0.53
CPSF1-201ENST00000526271 RNF7Q9UBF6 113 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 FAM32AQ9Y421 112 aaKnown RBP11.74□□□□□ -0.53
CPSF1-201ENST00000526271 G3V4G9 280 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 M0QZ24 198 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 DVL1O14640 695 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 FKBP6O75344 327 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 CRYBA1P05813 215 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 HIST1H1CP16403 213 aaKnown RBP11.73□□□□□ -0.53
CPSF1-201ENST00000526271 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
CPSF1-201ENST00000526271 NPY4RP50391 375 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 HMGA2P52926 109 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 PNKDQ8N490 385 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 Q8N7P7 452 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 OR4K13Q8NH42 304 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 ERGIC1Q969X5 290 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 ATF6BQ99941 703 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 YY1AP1Q9H869 796 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
CPSF1-201ENST00000526271 OOEPA6NGQ2 149 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 TIMM23O14925 209 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 TFF1P04155 84 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 LCATP04180 440 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 H1F0P07305 194 aaKnown RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 SELLP14151 372 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 CENPAP49450 140 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 RPL15P61313 204 aaKnown RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 TEX36Q5VZQ5 186 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 FAM110DQ8TAY7 271 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 ERMAPQ96PL5 475 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 PITX2Q99697 317 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 ADAT1Q9BUB4 502 aaKnown RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 HCAR1Q9BXC0 346 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 RPRD1BQ9NQG5 326 aaKnown RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 C1orf123Q9NWV4 160 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 ERVK-18Q9QC07 812 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
CPSF1-201ENST00000526271 TMEM5Q9Y2B1 443 aa11.72□□□□□ -0.53
CPSF1-201ENST00000526271 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 H3BNX3 289 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 ARPC3O15145 178 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 TSPAN9O75954 239 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 KRT36O76013 467 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 PYCR1P32322 319 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 SMIM11AP58511 58 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 KLRD1Q13241 179 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 PDCD1Q15116 288 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 OR8G1Q15617 311 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 RFX4Q33E94 735 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 KLHL12Q53G59 568 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 ZFP1Q6P2D0 407 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 SMARCD3Q6STE5 483 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 SDR9C7Q8NEX9 313 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 OR11L1Q8NGX0 322 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 OR2T29Q8NH02 315 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 C17orf50Q8WW18 174 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 OR52D1Q9H346 318 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 KAAG1Q9UBP8 84 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 SIGLEC9Q9Y336 463 aa11.71□□□□□ -0.53
CPSF1-201ENST00000526271 M0R135 149 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 TIPRLO75663 272 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 CST1P01037 141 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 LIPFP07098 398 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 SLC2A1P11166 492 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 IRF2P14316 349 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 CRABP1P29762 137 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 RRM2P31350 389 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 RPS6KA3P51812 740 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 CSNK2BP67870 215 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 OR8B8Q15620 311 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 FGD3Q5JSP0 725 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 KPRPQ5T749 579 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-201ENST00000526271 METTL11BQ5VVY1 283 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 CD276Q5ZPR3 534 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 HCP5Q6MZN7 132 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 Q6ZPA2 131 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
CPSF1-201ENST00000526271 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms