RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DHRS7CA6NNS2 312 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 A8MUA0 341 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 TMEM114B3SHH9 223 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 H3BQF6 201 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 WWP2O00308 870 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 FOXE1O00358 373 aaPredicted RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 AZIN1O14977 448 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 BIRC5O15392 142 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 LYPLA1O75608 230 aaPredicted RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 KRT34O76011 436 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 OR5F1O95221 314 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PRB1P04280 392 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SERPINE1P05121 402 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 FUT1P19526 365 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 BGNP21810 368 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CPN2P22792 545 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 EVI2BP34910 448 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SERPINB5P36952 375 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PTGFRP43088 359 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SLC18A1P54219 525 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 OR4D2P58180 307 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 RPL38P63173 70 aaKnown RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 BST1Q10588 318 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ASPHQ12797 758 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SLAMF1Q13291 335 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 GNA13Q14344 377 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CHI3L2Q15782 390 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SNCBQ16143 134 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SFT2D3Q587I9 215 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ZNF311Q5JNZ3 666 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CFAP157Q5JU67 520 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 OR5M10Q6IEU7 315 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 OR52E8Q6IFG1 317 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SCIMPQ6UWF3 145 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 RNF165Q6ZSG1 346 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 NDUFAF7Q7L592 441 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 COMMD6Q7Z4G1 85 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 NUDCD3Q8IVD9 361 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 C9orf40Q8IXQ3 194 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 C10orf67Q8IYJ2 551 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 UBQLNLQ8IYU4 475 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 MTURNQ8N3F0 131 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PLPP5Q8NEB5 264 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 FDCSPQ8NFU4 85 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CNIH3Q8TBE1 160 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 AGR3Q8TD06 166 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ADAMTS16Q8TE57 1224 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 TWIST2Q8WVJ9 160 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 UCN3Q969E3 161 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ADIPOR1Q96A54 375 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SLC25A38Q96DW6 304 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 VSIG2Q96IQ7 327 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 IMMP1LQ96LU5 166 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 IP6K3Q96PC2 410 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SORT1Q99523 831 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CENPKQ9BS16 269 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 NUDT9Q9BW91 350 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 EBPLQ9BY08 206 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 C20orf27Q9GZN8 174 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ING2Q9H160 280 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PTGES2Q9H7Z7 377 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ISG20L2Q9H9L3 353 aaKnown RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 ZNF160Q9HCG1 818 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 LYRM4Q9HD34 91 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SDHAF3Q9NRP4 125 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 GLRX2Q9NS18 164 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 LYARQ9NX58 379 aaKnown RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 AHSPQ9NZD4 102 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PHF11Q9UIL8 331 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CELA1Q9UNI1 258 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 ABCG2Q9UNQ0 655 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 FOXJ3Q9UPW0 622 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 MOKQ9UQ07 419 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CFL2Q9Y281 166 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 MRPS33Q9Y291 106 aaKnown RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 TP53TG5Q9Y2B4 290 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 C15orf41Q9Y2V0 281 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 POLR3HQ9Y535 204 aaPredicted RBP2.81□□□□□ -1.96
CD44-219ENST00000525685 ASB4Q9Y574 426 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SPACA6W5XKT8 324 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 CPAMD8Q8IZJ3 1885 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SCN3AQ9NY46 2000 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 WDFY3Q8IZQ1 3526 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 FRYQ5TBA9 3013 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SPTBN2O15020 2390 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SPTBP11277 2137 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CCDC88CQ9P219 2028 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TNRC6AQ8NDV7 1962 aaKnown RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 ZSCAN5BA6NJL1 495 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 A8MU10 97 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 MKRN2OSH3BPM6 223 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 HDAC3O15379 428 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CTNSO60931 367 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SNNO75324 88 aaPredicted RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 SERF1AO75920 110 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 MYO1DO94832 1006 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 LYPD3O95274 346 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CLPSP04118 112 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SERPINA7P05543 415 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms