RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SLC6A7Q99884 636 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 NUDT16L1Q9BRJ7 211 aaKnown RBP6.93□□□□□ -1.3
SPIDR-223ENST00000524033 ZNF416Q9BWM5 594 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
SPIDR-223ENST00000524033 SLC7A5P2Q9GIP4 190 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 ATG5Q9H1Y0 275 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 SYT4Q9H2B2 425 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 PIGMQ9H3S5 423 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 TMEM138Q9NPI0 162 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 UBQLN4Q9NRR5 601 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 TAS2R4Q9NYW5 299 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 GRHPRQ9UBQ7 328 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 FBLN5Q9UBX5 448 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 PRODH2Q9UF12 536 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 ZNF175Q9Y473 711 aa6.93□□□□□ -1.3
SPIDR-223ENST00000524033 UNC13CQ8NB66 2214 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TRAV36DV7A0A075B6V5 113 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 A0A0A6YYC8 382 aaPredicted RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 A0A1W2PQD3 144 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 KANTRA0A1W2PQU2 76 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 C9orf170A2RU37 121 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 PRSS37A4D1T9 235 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 FRG2CA6NGY1 282 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 OR5H14A6NHG9 310 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ARGFXA6NJG6 315 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 DBX1A6NMT0 343 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TMEM150CB9EJG8 249 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 I3L1I5 382 aaPredicted RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ADAM10O14672 748 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 SIGLEC5O15389 551 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ZNF264O43296 627 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 SLC25A12O75746 678 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ATG12O94817 140 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MT-ATP6P00846 226 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 APOC3P02656 99 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 AMY2AP04746 511 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ISG15P05161 165 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 CD79AP11912 226 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 HTR2CP28335 458 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TACR3P29371 465 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 NTF4P34130 210 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 RPS27P42677 84 aaKnown RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 LUMP51884 338 aaPredicted RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 CAPZA1P52907 286 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 HSD17B7P56937 341 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 RPL27P61353 136 aaKnown RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 BTG2P78543 158 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 QRFPP83859 136 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 NAAAQ02083 359 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 SNTB1Q13884 538 aaKnown RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 SERTAD2Q14140 314 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 STK11Q15831 433 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 PCK2Q16822 640 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 PNLIPRP3Q17RR3 467 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MICBQ29980 383 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MOGAT2Q3SYC2 334 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 FAM69BQ5VUD6 431 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 DHRS7BQ6IAN0 325 aaPredicted RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 LCN10Q6JVE6 187 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 CORO6Q6QEF8 472 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 NDUFAF7Q7L592 441 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 CCDC36Q8IYA8 594 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 PM20D2Q8IYS1 436 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 BPIFB2Q8N4F0 458 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 NKAIN3Q8N8D7 197 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 GATSQ8NAP1 163 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 DMBX1Q8NFW5 382 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 OR1S2Q8NGQ3 325 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 OR6S1Q8NH40 331 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 OR1L3Q8NH93 324 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MITD1Q8WV92 249 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 VRK1Q99986 396 aaPredicted RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 NUDT9Q9BW91 350 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TXNIPQ9H3M7 391 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 G6PC2Q9NQR9 355 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MRTO4Q9UKD2 239 aaKnown RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 DHDHQ9UQ10 334 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 MRPS33Q9Y291 106 aaKnown RBP6.92□□□□□ -1.3
SPIDR-223ENST00000524033 OR10H1Q9Y4A9 318 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 LRP12Q9Y561 859 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 R4GMQ9 66 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 FREM3P0C091 2139 aa6.92□□□□□ -1.3
SPIDR-223ENST00000524033 IGKV3D-11A0A0A0MRZ8 115 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 A0A0B4J2A0 478 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 TMEM218A2RU14 115 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 FITM1A5D6W6 292 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 CYSRT1A8MQ03 144 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 CEACAM18A8MTB9 384 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 NUDT19A8MXV4 375 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 ZNF736B4DX44 427 aaPredicted RBP6.91□□□□□ -1.3
SPIDR-223ENST00000524033 DISC1C4P0D8 188 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 RAB27BO00194 218 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 TO15178 435 aa6.91□□□□□ -1.3
SPIDR-223ENST00000524033 NUPL2O15504 423 aaKnown RBP6.91□□□□□ -1.3
SPIDR-223ENST00000524033 MTRF1O75570 445 aaKnown RBP6.91□□□□□ -1.3
SPIDR-223ENST00000524033 IGKV3-11P04433 115 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms