RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SMR3AQ99954 134 aa10.63□□□□□ -0.71
VEGFA-225ENST00000523950 ADAT1Q9BUB4 502 aaKnown RBP10.63□□□□□ -0.71
VEGFA-225ENST00000523950 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-225ENST00000523950 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
VEGFA-225ENST00000523950 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
VEGFA-225ENST00000523950 ZNF319Q9P2F9 582 aa10.63□□□□□ -0.71
VEGFA-225ENST00000523950 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
VEGFA-225ENST00000523950 EXOGQ9Y2C4 368 aaKnown RBP10.63□□□□□ -0.71
VEGFA-225ENST00000523950 R4GMQ9 66 aa10.63□□□□□ -0.71
VEGFA-225ENST00000523950 A0A1W2PQL4 384 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 METTL15A6NJ78 407 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 LOC110117498-PIK3R3F6TDL0 507 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 H0YAE9 185 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 J3QRE1 110 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 PSMD9O00233 223 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 SRSF10O75494 262 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 PTBP3O95758 552 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 DBTP11182 482 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 ANOS1P23352 680 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 GSK3AP49840 483 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 ZNF91Q05481 1191 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 KRTAP1-1Q07627 177 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 OR8G1Q15617 311 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 CYB5R2Q6BCY4 276 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 FAM220AQ7Z4H9 259 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 KCTD20Q7Z5Y7 419 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 DHRSXQ8N5I4 330 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 RFLNBQ8N5W9 214 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 TSC22D3Q99576 134 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 TTTY10Q9BZA0 68 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 PBOV1Q9GZY1 135 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 INPP5EQ9NRR6 644 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 MRM2Q9UI43 246 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 PPP1R3CQ9UQK1 317 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 RPL36Q9Y3U8 105 aaKnown RBP10.62□□□□□ -0.71
VEGFA-225ENST00000523950 SNX5Q9Y5X3 404 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 HSPE1-MOB4S4R3N1 261 aa10.62□□□□□ -0.71
VEGFA-225ENST00000523950 IRGMA1A4Y4 181 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 F5H5P2 479 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 H0YL77 283 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 MTRF1O75570 445 aaKnown RBP10.61□□□□□ -0.71
VEGFA-225ENST00000523950 FSTL3O95633 263 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 IGHV4-31P0DP07 118 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 CA6P23280 308 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 GNALP38405 381 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 PRSS12P56730 875 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ACTA2P62736 377 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ACTG2P63267 376 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ADARB1P78563 741 aaKnown RBP10.61□□□□□ -0.71
VEGFA-225ENST00000523950 IL5RAQ01344 420 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 RAB40BQ12829 278 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 GFOD2Q3B7J2 385 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 KLHL22Q53GT1 634 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ZBTB37Q5TC79 503 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 KRT74Q7RTS7 529 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 SSX6Q7RTT6 188 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ACBD7Q8N6N7 88 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 YIPF7Q8N8F6 280 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 CYGBQ8WWM9 190 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 TBX5Q99593 518 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 ADI1Q9BV57 179 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 C14orf119Q9NWQ9 140 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 OR52A1Q9UKL2 312 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 WIPI2Q9Y4P8 454 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 MPC1Q9Y5U8 109 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 NPTNQ9Y639 398 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 CACNG2Q9Y698 323 aa10.61□□□□□ -0.71
VEGFA-225ENST00000523950 DAPL1A0PJW8 107 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 ANXA2P2A6NMY6 339 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 APOL3O95236 402 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 TNFAIP8O95379 198 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 FADS2O95864 444 aaKnown RBP10.6□□□□□ -0.71
VEGFA-225ENST00000523950 PNPP00491 289 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CST4P01036 141 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 HLA-DPB1P04440 258 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 IRF2P14316 349 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CPT2P23786 658 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CAPGP40121 348 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 MAP2K3P46734 347 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 ISL1P61371 349 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 ZNF85Q03923 595 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 MFGE8Q08431 387 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-225ENST00000523950 MAB21L1Q13394 359 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CDONQ4KMG0 1287 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 TMEM155Q4W5P6 130 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 SPRNQ5BIV9 151 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 LIPNQ5VXI9 398 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 ELMOD2Q8IZ81 293 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 OR11L1Q8NGX0 322 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 OR8S1Q8NH09 359 aa10.6□□□□□ -0.71
VEGFA-225ENST00000523950 CLDND2Q8NHS1 167 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms