RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 C11orf42Q8N5U0 333 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 HAO2Q9NYQ3 351 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 VSX1Q9NZR4 365 aaPredicted RBP11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 VAPAQ9P0L0 249 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 RPS6KA6Q9UK32 745 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 MED31Q9Y3C7 131 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 SMAD5-AS1Q9Y6J3 95 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 TRBV5-3A0A0A0MS03 114 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 BHLHE40O14503 412 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 AHCYL1O43865 530 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 TYROBPO43914 113 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 RHBDL1O75783 438 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 MYCNOSP40205 109 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 DYNLT3P51808 116 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 ZNF92Q03936 586 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 CORO6Q6QEF8 472 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 FAM185AQ8N0U4 392 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 OR5K1Q8NHB7 308 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 FOXRED1Q96CU9 486 aaPredicted RBP11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 MED30Q96HR3 178 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 Q96M85 177 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 SNTG1Q9NSN8 517 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 ADAM18Q9Y3Q7 739 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
NKX3-1-202ENST00000523261 TRAV27A0A087WT01 109 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 GGT3PA6NGU5 568 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 SIGLEC5O15389 551 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 SLC16A7O60669 478 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 KHDRBS3O75525 346 aaKnown RBP11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 ANOS1P23352 680 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 SDHAP31040 664 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 GGT2P36268 569 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 NAA10P41227 235 aaPredicted RBP11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 RPL23AP62750 156 aaKnown RBP11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 SSX2Q16385 188 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 MEP1BQ16820 701 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 DPY19L4Q7Z388 723 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 PIGWQ7Z7B1 504 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 OR51A7Q8NH64 312 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 OR2AE1Q8NHA4 323 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 ANGPTL6Q8NI99 470 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 RAB3IPQ96QF0 476 aaPredicted RBP11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 WDR13Q9H1Z4 485 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 RERGLQ9H628 205 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
NKX3-1-202ENST00000523261 XKRYO14609 159 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 IMPA2O14732 288 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 OR5F1O95221 314 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 JUNBP17275 347 aaPredicted RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 CEBPDP49716 269 aaPredicted RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 TAS2R41P59536 307 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 GMFBP60983 142 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 MXRA7P84157 204 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 CFAP77Q6ZQR2 320 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 C17orf53Q8N3J3 647 aaPredicted RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 C11orf65Q8NCR3 313 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 OR1M1Q8NGA1 313 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 OR56B2PQ8NGI1 322 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 TAMM41Q96BW9 452 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 BPIFA2Q96DR5 249 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 MALSU1Q96EH3 234 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 SYT4Q9H2B2 425 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 GRHPRQ9UBQ7 328 aa11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 TBL2Q9Y4P3 447 aaKnown RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 PLECQ15149 4684 aaKnown RBP11.02□□□□□ -0.65
NKX3-1-202ENST00000523261 BIRC5O15392 142 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 LPLP06858 475 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 IFI30P13284 250 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 AZGP1P25311 298 aaKnown RBP11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 SLC25A1P53007 311 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 PIN1Q13526 163 aaPredicted RBP11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 FAM122BQ7Z309 247 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 TSEN54Q7Z6J9 526 aaKnown RBP11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 MNS1Q8NEH6 495 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 OR8S1Q8NH09 359 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 ATF6BQ99941 703 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 LGALS13Q9UHV8 139 aa11.01□□□□□ -0.65
NKX3-1-202ENST00000523261 SCOCQ9UIL1 159 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms