RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MAGEL2Q9UJ55 1249 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 KCNG2Q9UJ96 466 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
MRPS28-209ENST00000522987 RNF114Q9Y508 228 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 CDH10Q9Y6N8 788 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 TET2Q6N021 2002 aaPredicted RBP12.74□□□□□ -0.37
MRPS28-209ENST00000522987 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 ANXA2P07355 339 aaKnown RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 SELLP14151 372 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 ENTPD1P49961 510 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 KLRD1Q13241 179 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 PCK2Q16822 640 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 HSP90B2PQ58FF3 399 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 ZNF362Q5T0B9 420 aaPredicted RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 CYP2R1Q6VVX0 501 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 FAM216BQ8N7L0 139 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 TBC1D15Q8TC07 691 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 CDRT15Q96T59 188 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 DDOQ99489 341 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 CITED1Q99966 193 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 TRIM15Q9C019 465 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 MED20Q9H944 212 aa12.73□□□□□ -0.37
MRPS28-209ENST00000522987 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
MRPS28-209ENST00000522987 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 TNFRSF11BO00300 401 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 NDUFA7O95182 113 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 PTBP3O95758 552 aaKnown RBP12.72□□□□□ -0.37
MRPS28-209ENST00000522987 TSPAN15O95858 294 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 GASTP01350 101 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 LIPFP07098 398 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 FMO3P31513 532 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 CX3CR1P49238 355 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 IKZF1Q13422 519 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 PDCD1Q15116 288 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 WDR38Q5JTN6 314 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 HIST2H2BDQ6DRA6 164 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 SLC16A9Q7RTY1 509 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 DPY19L4Q7Z388 723 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 C11orf53Q8IXP5 236 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 PNKDQ8N490 385 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 OR4Q3Q8NH05 313 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 UBE2FQ969M7 185 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 OTULINQ96BN8 352 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 SNTG1Q9NSN8 517 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 C14orf119Q9NWQ9 140 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 TAS2R1Q9NYW7 299 aa12.72□□□□□ -0.37
MRPS28-209ENST00000522987 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
MRPS28-209ENST00000522987 DHRS12A0PJE2 317 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 M0QZ24 198 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 ACOT8O14734 319 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 HSD17B1P14061 328 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 SPI1P17947 270 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 PRDX6P30041 224 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 BPIFB3P59826 476 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 EIF2B1Q14232 305 aaKnown RBP12.71□□□□□ -0.37
MRPS28-209ENST00000522987 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 TMEM86BQ8N661 226 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 AQP11Q8NBQ7 271 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
MRPS28-209ENST00000522987 DYRK2Q92630 601 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 REEP6Q96HR9 211 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 RBM4BQ9BQ04 359 aaKnown RBP12.71□□□□□ -0.37
MRPS28-209ENST00000522987 CNTD2Q9H8S5 307 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 IL1RAPQ9NPH3 570 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 ARL8BQ9NVJ2 186 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 CD300AQ9UGN4 299 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 FAM96BQ9Y3D0 163 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 LYVE1Q9Y5Y7 322 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 POMT1Q9Y6A1 747 aa12.71□□□□□ -0.37
MRPS28-209ENST00000522987 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF878C9JN71 531 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 XRCC2O43543 280 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 NDUFA2O43678 99 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 LHBP01229 141 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 ATP6V1B2P21281 511 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 HSD11B1P28845 292 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 IER3P46695 156 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 MXRA7P84157 204 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 FAM3AP98173 230 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 SAMD4BQ5PRF9 694 aaKnown RBP12.7□□□□□ -0.38
MRPS28-209ENST00000522987 TEX36Q5VZQ5 186 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 Q6ZSV7 163 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 ERI1Q8IV48 349 aaKnown RBP12.7□□□□□ -0.38
MRPS28-209ENST00000522987 PGAM4Q8N0Y7 254 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 LINC00471Q8N535 108 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 SPERTQ8NA61 448 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 PLPP7Q8NBV4 271 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms