RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ST8SIA4Q92187 359 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 YIPF5Q969M3 257 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 TAAR6Q96RI8 345 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 SUCNR1Q9BXA5 334 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 RAB1BQ9H0U4 201 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 KCNE3Q9Y6H6 103 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 TMEM30CPA0ZSE6 113 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 C20orf202A1L168 122 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 TESK1Q15569 626 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 OTOSQ8NHW6 89 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 RND1Q92730 232 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 OR8B4Q96RC9 309 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 FGF20Q9NP95 211 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 A0A1B0GTL3 188 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 A0A1W2PPC1 479 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF705GA8MUZ8 300 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 LALBAP00709 142 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 C2orf76Q3KRA6 126 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 OR2B11Q5JQS5 317 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 STAC2Q6ZMT1 411 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SH2D5Q6ZV89 423 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 D2HGDHQ8N465 521 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 ING1Q9UK53 422 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 PPIHO43447 177 aaKnown RBP14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 FCGR2CP31995 323 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 ALKBH6Q3KRA9 238 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC7A6Q92536 515 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 FSCN3Q9NQT6 498 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SMCO4Q9NRQ5 59 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 TSTD3H0UI37 97 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 TAAR5O14804 337 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 CD3EP07766 207 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC25A1P53007 311 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SOX8P57073 446 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 PRSS41Q7RTY9 318 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 OCIAD1Q9NX40 245 aa14.59□□□□□ -0.07
PCDHA3-201ENST00000522353 SH2D7A6NKC9 451 aaPredicted RBP14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 UBE2G1P62253 170 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 FOXB2Q5VYV0 432 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 UBAC2Q8NBM4 344 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 OR10P1Q8NGE3 313 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 SCARB1Q8WTV0 552 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 PELI1Q96FA3 418 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 LOXL4Q96JB6 756 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 TPPP3Q9BW30 176 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 UCK1Q9HA47 277 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 C12orf10Q9HB07 376 aa14.58□□□□□ -0.07
PCDHA3-201ENST00000522353 FAM221AA4D161 298 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 CCL4P13236 92 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 SRP14P37108 136 aaKnown RBP14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 SIX6O95475 246 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 OR10A3P58181 314 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 TMEM41BQ5BJD5 291 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF425Q6IV72 752 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 RNF165Q6ZSG1 346 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 GPX8Q8TED1 209 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 RAB1CQ92928 201 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 MN1Q10571 1320 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 GPM6AP51674 278 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 VMA21Q3ZAQ7 101 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 OR2G3Q8NGZ4 309 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF75AQ96N20 296 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF768Q9H5H4 540 aaKnown RBP14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 FAM60AQ9NP50 221 aa14.58□□□□□ -0.08
PCDHA3-201ENST00000522353 MAGEB4O15481 346 aaPredicted RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 CYC1P08574 325 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 MGST1P10620 155 aaKnown RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 DHODHQ02127 395 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 MPPED2Q15777 294 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 TMEM230Q96A57 120 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 RNF24Q9Y225 148 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 TRAF3IP2O43734 574 aaPredicted RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 AVPR2P30518 371 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 BMI1P35226 326 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 TMUB2Q71RG4 321 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 FAM58AQ8N1B3 248 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 OR10R2Q8NGX6 335 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 NDFIP1Q9BT67 221 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 TAF9BQ9HBM6 251 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 PURGQ9UJV8 347 aaKnown RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 FUT3P21217 361 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 KLF3P57682 345 aaPredicted RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 DGCR2P98153 550 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 BTN1A1Q13410 526 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 BATFQ16520 125 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 SPANXN5Q5MJ07 72 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 MOB3BQ86TA1 216 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 MARC2Q969Z3 335 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 IL20Q9NYY1 176 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 SERTM1A2A2V5 107 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 ACTL6AO96019 429 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 MT-ND4LP03901 98 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 BPIFB3P59826 476 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 RAC3P60763 192 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 RHOUQ7L0Q8 258 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 NUDCD2Q8WVJ2 157 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 DNAJB12Q9NXW2 375 aaKnown RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 SDCBPO00560 298 aaPredicted RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 AQP7O14520 342 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms