RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RRADP55042 308 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 NDUFA6P56556 154 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 FZD2Q14332 565 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 BATFQ16520 125 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM182Q6ZP80 229 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ARRDC1Q8N5I2 433 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 C11orf40Q8WZ69 217 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 SLC17A5Q9NRA2 495 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 MT-ND4LP03901 98 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ERGP11308 486 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM128Q5BJH2 165 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ARV1Q9H2C2 271 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 PRELID3BQ9Y3B1 194 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 BCL2L11O43521 198 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 TPPPO94811 219 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 GLULP15104 373 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 SSX2Q16385 188 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ARTNQ5T4W7 220 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 LRRC61Q9BV99 259 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 OR5V1Q9UGF6 321 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 FAM221AA4D161 298 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 KIAA0141Q14154 515 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 LGALSLQ3ZCW2 172 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF425Q6IV72 752 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 VHLLQ6RSH7 139 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM178AQ8NBL3 297 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 NANPQ8TBE9 248 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 C10orf90Q96M02 699 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 NRTNQ99748 197 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 CABIN1Q9Y6J0 2220 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF638Q14966 1978 aaKnown RBP12.42□□□□□ -0.42
SYNPO-205ENST00000522122 HS3ST1O14792 307 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 RPS2P15880 293 aaKnown RBP12.41□□□□□ -0.42
SYNPO-205ENST00000522122 AVPR2P30518 371 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 PSMB3P49720 205 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 RAB11AP62491 216 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 MPPED2Q15777 294 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 ADIRFQ15847 76 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 LHFPL2Q6ZUX7 228 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 C12orf10Q9HB07 376 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 LRP3O75074 770 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 WFDC6Q9BQY6 131 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 HIPK2Q9H2X6 1198 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 ANKUB1A6NFN9 424 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 HMSDA8MTL9 139 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 HLA-HP01893 362 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 SRFP11831 508 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 RTN4IP1Q8WWV3 396 aaPredicted RBP12.41□□□□□ -0.42
SYNPO-205ENST00000522122 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 MRPS2Q9Y399 296 aaKnown RBP12.41□□□□□ -0.42
SYNPO-205ENST00000522122 LINC01565O15544 149 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 SPINT2O43291 252 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 CXCL13O43927 109 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 GRPP07492 148 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 FUT5Q11128 374 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 TBC1D28Q2M2D7 210 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 C11orf87Q6NUJ2 197 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 HIST2H3AQ71DI3 136 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 FBXW5Q969U6 566 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 GHITMQ9H3K2 345 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 LANCL2Q9NS86 450 aa12.41□□□□□ -0.42
SYNPO-205ENST00000522122 HSBP1L1C9JCN9 74 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 TRIM77I1YAP6 450 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 NFYBP25208 207 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 ABCD3P28288 659 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
SYNPO-205ENST00000522122 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 AK3Q9UIJ7 227 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
SYNPO-205ENST00000522122 FAM186AA6NE01 2351 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 FAM166BA8MTA8 275 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 SERPINE3A8MV23 424 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 CD37P11049 281 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF117Q03924 483 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 RDH5Q92781 318 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
SYNPO-205ENST00000522122 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 DMRTC1Q5HYR2 192 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 HGDQ93099 445 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 CES1P1Q9UKY3 287 aa12.4□□□□□ -0.42
SYNPO-205ENST00000522122 MDFIC2A0A1B0GVS7 189 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms