RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 CACNG8Q8WXS5 425 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 RNF170Q96K19 258 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 ZNF681Q96N22 645 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 RPS6KB2Q9UBS0 482 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 SAMD9Q5K651 1589 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 SBNO1A3KN83 1393 aa3.37□□□□□ -1.87
CTNNA1-233ENST00000522052 ERVK-7P63135 1459 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 SPTBN5Q9NRC6 3674 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 ADGRB3O60242 1522 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 IGHV3-66A0A0C4DH42 116 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 OR6C74A6NCV1 312 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 KLLNB2CW77 178 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 ANKRD63C9JTQ0 380 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 INS-IGF2F8WCM5 200 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 RFXANKO14593 260 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 SLC16A7O60669 478 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 GLAP06280 429 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 CD37P11049 281 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 PSMC3P17980 439 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 HOXA9P31269 272 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 GPR4P46093 362 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 RPS10P46783 165 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 TMPRSS11AQ6ZMR5 421 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 SNX20Q7Z614 316 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 PRSS58Q8IYP2 241 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 SPAG16Q8N0X2 631 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 RNF175Q8N4F7 328 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 COX18Q8N8Q8 333 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 WDR31Q8NA23 367 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 MDS2Q8NDY4 140 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 OR11H7Q8NGC8 314 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 OR6K6Q8NGW6 343 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 EXOSC8Q96B26 276 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 DCPSQ96C86 337 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 CHAC1Q9BUX1 264 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 SAV1Q9H4B6 383 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 REEP1Q9H902 201 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 EDA2RQ9HAV5 297 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 MED4Q9NPJ6 270 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 PRG3Q9Y2Y8 225 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 MN1Q10571 1320 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 LAMC1P11047 1609 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 THSD7AQ9UPZ6 1657 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 NOS1P29475 1434 aa3.36□□□□□ -1.87
CTNNA1-233ENST00000522052 RPRD2Q5VT52 1461 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 KCPQ6ZWJ8 1503 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 PDZK1P1A8MUH7 402 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 K7ERQ8 282 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 NMT2O60551 498 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 VAPBO95292 243 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 LCA5LO95447 670 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 CTSLP07711 333 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 CCL2P13500 99 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ADRB3P13945 408 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 MYL9P24844 172 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 HTR2CP28335 458 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 CCR6P51684 374 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 OR2B8PP59922 312 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SLC35B1P78383 322 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ERCC8Q13216 396 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ATP6V1FQ16864 119 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 PCP2Q8IVA1 136 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 C11orf53Q8IXP5 236 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 TCAIMQ8N3R3 496 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ABHD3Q8WU67 409 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ASZ1Q8WWH4 475 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 GLT1D1Q96MS3 346 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ZIM3Q96PE6 472 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 HINT2Q9BX68 163 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SLIRPQ9GZT3 109 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 RAB1BQ9H0U4 201 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SPNS1Q9H2V7 528 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SLC40A1Q9NP59 571 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 MYOZ1Q9NP98 299 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SLC17A7Q9P2U7 560 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 GGA2Q9UJY4 613 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 RBMX2Q9Y388 322 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 AGRNO00468 2067 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 ASTN1O14525 1302 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 PCDH11XQ9BZA7 1347 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 TTC28Q96AY4 2481 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 MARF1Q9Y4F3 1742 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 PIK3R4Q99570 1358 aa3.35□□□□□ -1.87
CTNNA1-233ENST00000522052 SYCP2Q9BX26 1530 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 TRBV6-6A0A0A6YYG2 114 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 A0A0B4J2E0 115 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 PINLYPA6NC86 204 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 E7EWF7 191 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 RP2O75695 350 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 NPPAP01160 153 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 BCHEP06276 602 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 TCN2P20062 427 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 MYCNOSP40205 109 aa3.34□□□□□ -1.87
CTNNA1-233ENST00000522052 RBM34P42696 430 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms