RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CLN6Q9NWW5 311 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 FAM206AQ9NX38 181 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 IKZF2Q9UKS7 526 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ATRQ13535 2644 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 TMEM269A0A1B0GVZ9 245 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 LRRC30A6NM36 301 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 KIAA1324LA8MWY0 1029 aaPredicted RBP17.35■□□□□ 0.37
TRIM35-203ENST00000521253 E9PQ18 207 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 PLPP2O43688 288 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 PTBP3O95758 552 aaKnown RBP17.35■□□□□ 0.37
TRIM35-203ENST00000521253 HNF1AP20823 631 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 MDH2P40926 338 aaKnown RBP17.35■□□□□ 0.37
TRIM35-203ENST00000521253 OR8B8Q15620 311 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 KLBQ86Z14 1044 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 KLHL36Q8N4N3 616 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 ERGIC1Q969X5 290 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 EME1Q96AY2 570 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 LYZL4Q96KX0 146 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 SLC29A1Q99808 456 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 IMPAD1Q9NX62 359 aa17.35■□□□□ 0.37
TRIM35-203ENST00000521253 TRAV20A0A0B4J274 112 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF670-ZNF695F2Z2N8 137 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 PHYHO14832 338 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 MAGEB4O15481 346 aaPredicted RBP17.34■□□□□ 0.37
TRIM35-203ENST00000521253 FAM20BO75063 409 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 APOL3O95236 402 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 BAG2O95816 211 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 PCMT1P22061 227 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 ACKR3P25106 362 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 DCTDP32321 178 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 RIDAP52758 137 aaKnown RBP17.34■□□□□ 0.37
TRIM35-203ENST00000521253 FAM201AQ5SY85 155 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 ZBTB49Q6ZSB9 765 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 SPERTQ8NA61 448 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 CSNK2A3Q8NEV1 391 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 OR11L1Q8NGX0 322 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 TRUB1Q8WWH5 349 aaKnown RBP17.34■□□□□ 0.37
TRIM35-203ENST00000521253 MBOAT4Q96T53 435 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 APOL4Q9BPW4 351 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 PCDHB10Q9UN67 800 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 RHBDD3Q9Y3P4 386 aa17.34■□□□□ 0.37
TRIM35-203ENST00000521253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.33■□□□□ 0.36
TRIM35-203ENST00000521253 ACOD1A6NK06 481 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 IRF2P14316 349 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 SRD5A1P18405 259 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 POU4F2Q12837 409 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF829Q3KNS6 432 aaPredicted RBP17.33■□□□□ 0.36
TRIM35-203ENST00000521253 C1orf87Q8N0U7 546 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 MUC20Q8N307 709 aaPredicted RBP17.33■□□□□ 0.36
TRIM35-203ENST00000521253 PLPP7Q8NBV4 271 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 STMN2Q93045 179 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 RFKQ969G6 155 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 TBX5Q99593 518 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 PAPOLGQ9BWT3 736 aaKnown RBP17.33■□□□□ 0.36
TRIM35-203ENST00000521253 PBOV1Q9GZY1 135 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 PPP1R3EQ9H7J1 279 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 FN3KRPQ9HA64 309 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 PATZ1Q9HBE1 687 aaKnown RBP17.33■□□□□ 0.36
TRIM35-203ENST00000521253 TMEM165Q9HC07 324 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF391Q9UJN7 358 aa17.33■□□□□ 0.36
TRIM35-203ENST00000521253 CEACAM18A8MTB9 384 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 GRPP07492 148 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 HOXA4Q00056 320 aaPredicted RBP17.32■□□□□ 0.36
TRIM35-203ENST00000521253 EGR3Q06889 387 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 MFGE8Q08431 387 aaPredicted RBP17.32■□□□□ 0.36
TRIM35-203ENST00000521253 MZT1Q08AG7 82 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 TMED1Q13445 227 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 SSX6Q7RTT6 188 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 OR8S1Q8NH09 359 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 G6PC2Q9NQR9 355 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 C14orf119Q9NWQ9 140 aa17.32■□□□□ 0.36
TRIM35-203ENST00000521253 MRM2Q9UI43 246 aaKnown RBP17.32■□□□□ 0.36
TRIM35-203ENST00000521253 FBN1P35555 2871 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PPIAL4EA0A075B759 164 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 A0A0U1RQV5 110 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 F5H0A9 414 aaPredicted RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PPIAL4DF5H284 164 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 ENTPD6O75354 484 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 SRSF10O75494 262 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 FSTL3O95633 263 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PNPP00491 289 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 OR2T7P0C7T2 308 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PPIAL4FP0DN26 164 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 ZFP36P26651 326 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 ATP6V1E1P36543 226 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 GNALP38405 381 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 SEC61A1P61619 476 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 SNRPGP62308 76 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 LCN2P80188 198 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 SLC25A30Q5SVS4 291 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 FAHD2BQ6P2I3 314 aaPredicted RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PLEKHG7Q6ZR37 379 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 FTMTQ8N4E7 242 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 OR2T27Q8NH04 317 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PPP1R14AQ96A00 147 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 FAHD2AQ96GK7 314 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 C1orf123Q9NWV4 160 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 RNF7Q9UBF6 113 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 NUFIP1Q9UHK0 495 aaKnown RBP17.31■□□□□ 0.36
TRIM35-203ENST00000521253 PPIAL4AQ9Y536 164 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms