RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MEF2DQ14814 521 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 RNASE10Q5GAN6 216 aaKnown RBP22.6■■□□□ 1.21
COL13A1-213ENST00000520267 OR8H3Q8N146 312 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 ROBO4Q8WZ75 1007 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 PSMF1Q92530 271 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 FLVCR1Q9Y5Y0 555 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 PINLYPA6NC86 204 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 DISC1C4P0D8 188 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 CXCL13O43927 109 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 CDC14BO60729 498 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 CFDP00746 253 aaPredicted RBP22.6■■□□□ 1.21
COL13A1-213ENST00000520267 EXOSC2Q13868 293 aaKnown RBP22.6■■□□□ 1.21
COL13A1-213ENST00000520267 C17orf107Q6ZR85 190 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 ELMOD3Q96FG2 381 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 GPER1Q99527 375 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 NUDT16L1Q9BRJ7 211 aaKnown RBP22.6■■□□□ 1.21
COL13A1-213ENST00000520267 TMPRSS13Q9BYE2 586 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 KCNK7Q9Y2U2 307 aa22.6■■□□□ 1.21
COL13A1-213ENST00000520267 F5H5P2 479 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 SOCS1O15524 211 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 TRAPPC6AO75865 159 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 OTX1P32242 354 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-213ENST00000520267 CYYR1Q96J86 154 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 SFXN2Q96NB2 322 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 PLEK2Q9NYT0 353 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 H3BUI4 141 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 M0R296 226 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 NOS1APO75052 506 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-213ENST00000520267 CXADRP78310 365 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 MRPS34P82930 218 aaKnown RBP22.59■■□□□ 1.21
COL13A1-213ENST00000520267 OPCMLQ14982 345 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 FAM27BQ5VT28 67 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 CRIP3Q6Q6R5 217 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 KCNG3Q8TAE7 436 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 C17orf50Q8WW18 174 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 IFT46Q9NQC8 304 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 V9GYS6 101 aa22.59■■□□□ 1.21
COL13A1-213ENST00000520267 FREM2Q5SZK8 3169 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 A0A0U1RQV5 110 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 A0A1W2PNU3 283 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-213ENST00000520267 ZNF716A6NP11 495 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 M0R233 179 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 CHRM2P08172 466 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 NFYAP23511 347 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-213ENST00000520267 CYB561P49447 251 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 PLAC9Q5JTB6 97 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 NPRL2Q8WTW4 380 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 MRGPRFQ96AM1 343 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 DDA1Q9BW61 102 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 MYOZ1Q9NP98 299 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-213ENST00000520267 RYDENQ9NUL5 291 aaKnown RBP22.58■■□□□ 1.21
COL13A1-213ENST00000520267 SLC2A8Q9NY64 477 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 FOXJ2Q9P0K8 574 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 VSIG4Q9Y279 399 aa22.58■■□□□ 1.21
COL13A1-213ENST00000520267 CCDC187A0A096LP49 1063 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 M0R135 149 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 CASRP41180 1078 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 C12orf45Q8N5I9 185 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-213ENST00000520267 ZNF799Q96GE5 643 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 ADGRG7Q96K78 797 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 LOC100509620A0A075B734 347 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 MCRIP1C9JLW8 97 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 L7N2F9 121 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 DHRS3O75911 302 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 PRF1P14222 555 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 HRH1P35367 487 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 CLDN15P56746 228 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 ECH1Q13011 328 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 PRRT1Q99946 306 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 TMEM59Q9BXS4 323 aa22.57■■□□□ 1.2
COL13A1-213ENST00000520267 FAHP16930 419 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 THBS4P35443 961 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 CD96P40200 585 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 MPPED2Q15777 294 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 C11orf88Q6PI97 169 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 OR5D18Q8NGL1 313 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 OR10D3Q8NH80 312 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 THOC3Q96J01 351 aaKnown RBP22.56■■□□□ 1.2
COL13A1-213ENST00000520267 CRLF2Q9HC73 371 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 CRTAPO75718 401 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-213ENST00000520267 IFNA7P01567 189 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 LIPCP11150 499 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 MPZP25189 248 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 GDF1P27539 372 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 TMEM50BP56557 158 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 KISS1Q15726 138 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 UBE2V2Q15819 145 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 C1QL2Q7Z5L3 287 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 OR2V1Q8NHB1 315 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 RAB3CQ96E17 227 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 ZNF224Q9NZL3 707 aa22.56■■□□□ 1.2
COL13A1-213ENST00000520267 OR3A3P47888 321 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 SNAI3Q3KNW1 292 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 SPINK14Q6IE38 97 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 MYO7BQ6PIF6 2116 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 CD59P13987 128 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 SEC61A1P61619 476 aaKnown RBP22.55■■□□□ 1.2
COL13A1-213ENST00000520267 DHRS2Q13268 280 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 IKZF1Q13422 519 aa22.55■■□□□ 1.2
COL13A1-213ENST00000520267 AAED1Q7RTV5 226 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms