RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 NLE1Q9NVX2 485 aaPredicted RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 SLC39A1Q9NY26 324 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 IL37Q9NZH6 218 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 SLC17A4Q9Y2C5 497 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 FHOD3Q2V2M9 1422 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZBED9Q6R2W3 1325 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 TRBV9A0A0B4J1U6 114 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 SIRPB1O00241 398 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 NME4O00746 187 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 TAAR5O14804 337 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 AQP9O43315 295 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 GATBO75879 557 aaKnown RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 CPSF4O95639 269 aaKnown RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 MMP7P09237 267 aaPredicted RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 UQCRFS1P1P0C7P4 283 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 HSPD1P10809 573 aaKnown RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 RAB4AP20338 218 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 MYCNOSP40205 109 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 KLF3P57682 345 aaPredicted RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 ART3Q13508 389 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 ZNF141Q15928 474 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 PDZD11Q5EBL8 140 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 LDLRAD2Q5SZI1 272 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 LIN9Q5TKA1 542 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 CMC1Q7Z7K0 106 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 MDP1Q86V88 176 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 BBS7Q8IWZ6 715 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 SLC25A29Q8N8R3 303 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 ZFP62Q8NB50 900 aaPredicted RBP0.69□□□□□ -2.3
PCM1-208ENST00000518877 OR5K2Q8NHB8 316 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 LYPD6BQ8NI32 183 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 RAB3IL1Q8TBN0 382 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 ACTL9Q8TC94 416 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 ELMO1Q92556 727 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 SGTBQ96EQ0 304 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 OR2V2Q96R30 315 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 VSIRQ9H7M9 311 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 KANK1Q14678 1352 aa0.69□□□□□ -2.3
PCM1-208ENST00000518877 A0A0A6YYD5 115 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 C15orf65H3BRN8 121 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 SLC19A2O60779 497 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 TRBV12-3P01733 135 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 IGHG2P01859 326 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 ZNF24P17028 368 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 SERPINB8P50452 374 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 ZNF121P58317 390 aaPredicted RBP0.68□□□□□ -2.3
PCM1-208ENST00000518877 BTN1A1Q13410 526 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 DDX39BQ13838 428 aaKnown RBP0.68□□□□□ -2.3
PCM1-208ENST00000518877 ZNF181Q2M3W8 571 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 ALKBH6Q3KRA9 238 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 C6orf99Q4VX62 202 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 TMEM236Q5W0B7 351 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 C22orf42Q6IC83 251 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 USP50Q70EL3 339 aaPredicted RBP0.68□□□□□ -2.3
PCM1-208ENST00000518877 FAM228AQ86W67 206 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 TBC1D21Q8IYX1 336 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 SLC26A10Q8NG04 563 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 OR7G2Q8NG99 324 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 OR4A4PQ8NGN8 299 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 OR13C2Q8NGS9 318 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 ENKURQ8TC29 256 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 SLC2A14Q8TDB8 520 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 RSPH1Q8WYR4 309 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 CDS1Q92903 461 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 OTUB2Q96DC9 234 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 CSPG4P5Q96PW8 444 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 DUSP21Q9H596 190 aa0.68□□□□□ -2.3
PCM1-208ENST00000518877 MYO9BQ13459 2157 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 IGKV1OR2-108A0A075B7D4 117 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 LOC102724200A0A096LPH7 203 aaPredicted RBP0.67□□□□□ -2.3
PCM1-208ENST00000518877 IZUMO1RA6ND01 250 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 A6NDN8 102 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 CHMP2AO43633 222 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 RAD1O60671 282 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 CD160O95971 181 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 IGHV1-46P01743 117 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 BCKDHBP21953 392 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 PBLDP30039 288 aaPredicted RBP0.67□□□□□ -2.3
PCM1-208ENST00000518877 PFN2P35080 140 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 PPICP45877 212 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 FABP6P51161 128 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 RAB10P61026 200 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 FMODQ06828 376 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 XKR7Q5GH72 579 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 APOBEC3HQ6NTF7 200 aaKnown RBP0.67□□□□□ -2.3
PCM1-208ENST00000518877 CD300LGQ6UXG3 332 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 FA2HQ7L5A8 372 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 CDH26Q8IXH8 852 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 ORMDL3Q8N138 153 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 RPEQ96AT9 228 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 FXYD5Q96DB9 178 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 BTN2A3PQ96KV6 586 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 SLC7A5P2Q9GIP4 190 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 TMEM165Q9HC07 324 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 PARP11Q9NR21 331 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 PTTG3PQ9NZH4 202 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 CLN8Q9UBY8 286 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 VWA8A3KMH1 1905 aa0.67□□□□□ -2.3
PCM1-208ENST00000518877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.67□□□□□ -2.3
PCM1-208ENST00000518877 NUP205Q92621 2012 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms