RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NXT1Q9UKK6 140 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 GUCA1BQ9UMX6 200 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TIMM10BQ9Y5J6 103 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 NUP188Q5SRE5 1749 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 A2MP01023 1474 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MYOM1P52179 1685 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 PLCH1Q4KWH8 1693 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 GCC2Q8IWJ2 1684 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MSH6P52701 1360 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1W2PPE3 182 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1W2PRG6 482 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 C9J4A7 227 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 K7N7A8 449 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 M0QZ92 97 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 M0QZK8 103 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 KPNA3O00505 521 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SLC9A3R1O14745 358 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 BET1O15155 118 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 MSH4O15457 936 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SGCEO43556 437 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SSNA1O43805 119 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM50AO95807 157 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CALB1P05937 261 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 RNH1P13489 461 aaKnown RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CELP19835 753 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 ATP6V1B2P21281 511 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 AQP1P29972 269 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CEACAM3P40198 252 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 RPL14P50914 215 aaKnown RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 OR4D2P58180 307 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 TAS2R60P59551 318 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 UBE2KP61086 200 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 AP1S1P61966 158 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 TNXAQ16473 311 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 ATP6V1FQ16864 119 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 KCTD19Q17RG1 926 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CCNJQ5T5M9 372 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 C1orf146Q5VVC0 180 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 FAM199XQ6PEV8 388 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 DNM1P34Q6PK57 102 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 ASCL4Q6XD76 172 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CERS6Q6ZMG9 384 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 AHSA2Q719I0 299 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SLC35F2Q8IXU6 374 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 HS3ST5Q8IZT8 346 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 PDIK1LQ8N165 341 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 STPG2Q8N412 459 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SVOPLQ8N434 492 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 LRRC75AQ8NAA5 344 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 LINC01555Q8NAE3 123 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 LFNGQ8NES3 379 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 OR4F6Q8NGB9 312 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 OR2V1Q8NHB1 315 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 COQ8AQ8NI60 647 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 PIGXQ8TBF5 258 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 MAGEE2Q8TD90 523 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 APH1BQ8WW43 257 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 MAFIPQ8WZ33 124 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 APH1AQ96BI3 265 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CXorf40BQ96DE9 158 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CCDC126Q96EE4 140 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SLC35E1Q96K37 410 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 OLFM3Q96PB7 478 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 QKIQ96PU8 341 aaKnown RBP eCLIP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 PLEKHF1Q96S99 279 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 FMO2Q99518 471 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NIPSNAP1Q9BPW8 284 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 DHRS9Q9BPW9 319 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 AIF1LQ9BQI0 150 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 ZYG11BQ9C0D3 744 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NAT10Q9H0A0 1025 aaKnown RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NXF5Q9H1B4 397 aaKnown RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 DEFB129Q9H1M3 183 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 GLIPR2Q9H4G4 154 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NHEJ1Q9H9Q4 299 aaPredicted RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 UGT1A10Q9HAW8 530 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 BEX1Q9HBH7 125 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 GID8Q9NWU2 228 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 CLN6Q9NWW5 311 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 TMCO1Q9UM00 188 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 UBQLN1Q9UMX0 589 aaKnown RBP2.49□□□□□ -2.01
VPS13B-207ENST00000518569 SCML2Q9UQR0 700 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 POLDIP2Q9Y2S7 368 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 MMACHCQ9Y4U1 282 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 PZPP20742 1482 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NLRP1Q9C000 1473 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 FGD6Q6ZV73 1430 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 UNC13BO14795 1591 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 NUP155O75694 1391 aa2.49□□□□□ -2.01
VPS13B-207ENST00000518569 PRDM15P57071 1507 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 GPATCH8Q9UKJ3 1502 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RREB1Q92766 1687 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 BCL9LQ86UU0 1499 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TRBV9A0A0B4J1U6 114 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1W2PNU3 283 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 LRP5LA4QPB2 252 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF729A6NN14 1252 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 LAD1O00515 517 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms