RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FAM71F1Q96KD3 344 aaPredicted RBP8.43□□□□□ -1.06
CLN8-202ENST00000517514 COG8Q96MW5 612 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 RGCCQ9H4X1 137 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 SP140LQ9H930 580 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 CBLN4Q9NTU7 201 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
CLN8-202ENST00000517514 TAAR3PQ9P1P4 343 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 GTF2A1LQ9UNN4 478 aa8.43□□□□□ -1.06
CLN8-202ENST00000517514 SF3B6Q9Y3B4 125 aaKnown RBP8.43□□□□□ -1.06
CLN8-202ENST00000517514 ANKRD17O75179 2603 aaKnown RBP8.43□□□□□ -1.06
CLN8-202ENST00000517514 TRBV2A0A0J9YWF9 115 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 TRBV5-5A0A0J9YX44 114 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 PNMA8CA0A1B0GUJ8 204 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 A6NIN4 97 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 CYSRT1A8MQ03 144 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 B9A039 149 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 H0YL77 283 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 MLNRO43193 412 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 CD1AP06126 327 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 CELP19835 753 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 ACHEP22303 614 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 GCH1P30793 250 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 RBMXP38159 391 aaKnown RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 GP2P55259 537 aaKnown RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 SLC3A1Q07837 685 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 MLLT11Q13015 90 aaPredicted RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 MALLQ13021 153 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 HNRNPA0Q13151 305 aaKnown RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 INSL4Q14641 139 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 PAMR1Q6UXH9 720 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 UNQ6126/PRO20091Q6UXV3 157 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 KCTD8Q6ZWB6 473 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 ZNF367Q7RTV3 350 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 MRPL21Q7Z2W9 205 aaKnown RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 FBXL14Q8N1E6 418 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 BHLHE23Q8NDY6 225 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 OR8G5Q8NG78 346 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 OR5AK2Q8NH90 309 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 GHSRQ92847 366 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 MUL1Q969V5 352 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 MGLLQ99685 303 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 SLC30A2Q9BRI3 323 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 MSL2Q9HCI7 577 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 TRIM36Q9NQ86 728 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 LAMP3Q9UQV4 416 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 RHBDD3Q9Y3P4 386 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 USF3Q68DE3 2245 aa8.42□□□□□ -1.06
CLN8-202ENST00000517514 FLNBO75369 2602 aaKnown RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
CLN8-202ENST00000517514 A0A087WXM4 84 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 TMEM212A6NML5 194 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 PIN1P1O15428 100 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 NDUFS7O75251 213 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 DHRS3O75911 302 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 IGHV1-46P01743 117 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 ADH4P08319 380 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 UBCP0CG48 685 aaKnown RBP8.41□□□□□ -1.06
CLN8-202ENST00000517514 NAT2P11245 290 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 CPEP16870 476 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 FAHP16930 419 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 JUNBP17275 347 aaPredicted RBP8.41□□□□□ -1.06
CLN8-202ENST00000517514 TGFBR2P37173 567 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 LIPAP38571 399 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 SYT6Q5T7P8 510 aaPredicted RBP8.41□□□□□ -1.06
CLN8-202ENST00000517514 TMEM244Q5VVB8 128 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 AGAP6Q5VW22 663 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 LIPKQ5VXJ0 399 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 TMEM42Q69YG0 159 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 UNQ9370/PRO34162Q6UXP9 181 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 DOK3Q7L591 496 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 PHC2Q8IXK0 858 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 ZNF676Q8N7Q3 588 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 HAVCR2Q8TDQ0 301 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 DVL3Q92997 716 aaPredicted RBP8.41□□□□□ -1.06
CLN8-202ENST00000517514 ORAI1Q96D31 301 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 LURAP1Q96LR2 239 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 MYCBPQ99417 103 aaPredicted RBP8.41□□□□□ -1.06
CLN8-202ENST00000517514 OPA3Q9H6K4 179 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 ZNF391Q9UJN7 358 aa8.41□□□□□ -1.06
CLN8-202ENST00000517514 TRBV5-7A0A0A0MS05 114 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 A0A1W2PPW3 197 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 GGT3PA6NGU5 568 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 SYT7O43581 403 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 TIMM8AO60220 97 aaPredicted RBP8.4□□□□□ -1.06
CLN8-202ENST00000517514 SC5DO75845 299 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 NCR1O76036 304 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 CST4P01036 141 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 HLA-DPB1P04440 258 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 ATP6V1B1P15313 513 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 CA6P23280 308 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 CFL1P23528 166 aaKnown RBP8.4□□□□□ -1.06
CLN8-202ENST00000517514 CDKN1AP38936 164 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 DDOSTP39656 456 aa8.4□□□□□ -1.06
CLN8-202ENST00000517514 MAP2K3P46734 347 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms