RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 C11orf72Q8NBR9 251 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 ANKRD20A12PQ8NF67 263 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 NANPQ8TBE9 248 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 CORO2AQ92828 525 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 KCNS1Q96KK3 526 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 FER1L6-AS2Q96M78 137 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 ARPC5LQ9BPX5 153 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 PECRQ9BY49 303 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 GABARAPL1Q9H0R8 117 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 AK6Q9Y3D8 172 aaKnown RBP-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 COL18A1P39060 1754 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 MYO18BQ8IUG5 2567 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 A0A087WX48 190 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 MEIKINA0A087WXM9 373 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMSB15BA0A087X1C1 80 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 IGHV3-15A0A0B4J1V0 119 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 A6NED7 52 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 CLOCKO15516 846 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 PGLYRP1O75594 196 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 OXSR1O95747 527 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 UQCRBP14927 111 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 MUTP22033 750 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 CASP4P49662 377 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 PPP5CP53041 499 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 ACTN3Q08043 901 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 AIMP1Q12904 312 aaKnown RBP-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 TAL2Q16559 108 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCDC40Q4G0X9 1142 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 DHDDSQ86SQ9 333 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 MDP1Q86V88 176 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMEM17Q86X19 198 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 DOLPP1Q86YN1 238 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 OR10G6Q8NH81 332 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 YIPF6Q96EC8 236 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 SERPINB12Q96P63 405 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 DERL3Q96Q80 235 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 TXNIPQ9H3M7 391 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 MFSD1Q9H3U5 465 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMEM27Q9HBJ8 222 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 PROK2Q9HC23 129 aa-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 AKAP7Q9P0M2 348 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-539P-201ENST00000516665 MCM3APO60318 1980 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZNF638Q14966 1978 aaKnown RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MUC17Q685J3 4493 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 IGHV1-69DA0A0B4J2H0 117 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 LOC107984156A0A0G2JMH3 177 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 RNF222A6NCQ9 220 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 CCDC69A6NI79 296 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ISLRO14498 428 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 POP7O75817 140 aaKnown RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 BCAS2O75934 225 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 GGPS1O95749 300 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MT-CO2P00403 227 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 SERPIND1P05546 499 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 C2P06681 752 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 PTHLHP12272 177 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 CYLC1P35663 651 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 IDH3GP51553 393 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MXD1Q05195 221 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 SKP2Q13309 424 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 RAB12Q6IQ22 244 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 KRT80Q6KB66 452 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 TRIM40Q6P9F5 258 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 CENPUQ71F23 418 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 GALNTL5Q7Z4T8 443 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 PDPNQ86YL7 162 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ARL17AQ8IVW1 177 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZNF565Q8N9K5 539 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 PXT1Q8NFP0 134 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR52H1Q8NGJ2 320 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR51T1Q8NGJ9 327 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR8S1Q8NH09 359 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ENKURQ8TC29 256 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 ST7LQ8TDW4 575 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 UFD1Q92890 307 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 SNX21Q969T3 373 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 S100PBPQ96BU1 408 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 SAMD8Q96LT4 415 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 C12orf66Q96MD2 445 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR4K3Q96R72 315 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 CNN2Q99439 309 aaKnown RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 RNF2Q99496 336 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 TREX2Q9BQ50 279 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 LPAR2Q9HBW0 351 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MORF4L1Q9UBU8 362 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 BCAP29Q9UHQ4 241 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 LAMP5Q9UJQ1 280 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MEMO1Q9Y316 297 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 SNX8Q9Y5X2 465 aa-2.79□□□□□ -2.86
RNU6-539P-201ENST00000516665 MYO7AQ13402 2215 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR52A4PA6NMU1 304 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 F6UB75 175 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 PLPP1O14494 284 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 TAAR5O14804 337 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 GYG2O15488 501 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 CIAO1O76071 339 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 AQP8O94778 261 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR4F21O95013 312 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 SEC11BP0C7V7 166 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR12D1P0DN82 309 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms