RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 H1FXQ92522 213 aaKnown RBP8.86□□□□□ -0.99
DDX41-216ENST00000513562 ZBTB9Q96C00 473 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 SEH1LQ96EE3 360 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 ZNF799Q96GE5 643 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 C7orf26Q96N11 449 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 TSSK2Q96PF2 358 aa8.86□□□□□ -0.99
DDX41-216ENST00000513562 DNAH1Q9P2D7 4330 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 A0A087WUU8 490 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 SOCS2O14508 198 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 ANGPTL7O43827 346 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 NDUFB2O95178 105 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 IFNA14P01570 189 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 PF4V1P10720 104 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CRABP1P29762 137 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CDKN2AP42771 156 aaKnown RBP8.85□□□□□ -0.99
DDX41-216ENST00000513562 CENPAP49450 140 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 TPTEP56180 551 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CD83Q01151 205 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 BLMHQ13867 455 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 TRAM2Q15035 370 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CYBRD1Q53TN4 286 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 GLYATL3Q5SZD4 288 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 DNM1P34Q6PK57 102 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 LINC00346Q8IVM7 164 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 OR56B2PQ8NGI1 322 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 OR5D13Q8NGL4 314 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 OR2AE1Q8NHA4 323 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CDCA4Q9BXL8 241 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 DNTTIP1Q9H147 329 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 RABEP2Q9H5N1 569 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 RHCGQ9UBD6 479 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CYB5R1Q9UHQ9 305 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 CAPN7Q9Y6W3 813 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 U3KQK5 164 aa8.85□□□□□ -0.99
DDX41-216ENST00000513562 A0A1W2PQ09 198 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 A0A1W2PRX2 142 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 VGLL3A8MV65 326 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 FFAR1O14842 300 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 PTP4A3O75365 173 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 PEX14O75381 377 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 TXNDC12O95881 172 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 PF4P02776 101 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 HOXD3P31249 432 aaPredicted RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 GSK3BP49841 420 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 CSNK2BP67870 215 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 DCTN2Q13561 401 aaKnown RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 CNN3Q15417 329 aaKnown RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 DGUOKQ16854 277 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 RFX4Q33E94 735 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 RABL3Q5HYI8 236 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 WDR93Q6P2C0 686 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 TBPL2Q6SJ96 375 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 ZNF730Q6ZMV8 503 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 ZNF788Q6ZQV5 615 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 OR1M1Q8NGA1 313 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 OR9Q1Q8NGQ5 310 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 DUS3LQ96G46 650 aaKnown RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 FNDC11Q9BVV2 318 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 TLNRD1Q9H1K6 362 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 OPA3Q9H6K4 179 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 NKIRAS1Q9NYS0 192 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 SLC25A10Q9UBX3 287 aaPredicted RBP8.84□□□□□ -0.99
DDX41-216ENST00000513562 B9D1Q9UPM9 204 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 TCF19Q9Y242 345 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 SIGLEC7Q9Y286 467 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 IER3IP1Q9Y5U9 82 aa8.84□□□□□ -0.99
DDX41-216ENST00000513562 NKX6-3A6NJ46 265 aa8.83□□□□□ -1
DDX41-216ENST00000513562 H0YAE9 185 aa8.83□□□□□ -1
DDX41-216ENST00000513562 J3KTA2 159 aa8.83□□□□□ -1
DDX41-216ENST00000513562 TIPRLO75663 272 aa8.83□□□□□ -1
DDX41-216ENST00000513562 PAICSP22234 425 aaKnown RBP8.83□□□□□ -1
DDX41-216ENST00000513562 OTX1P32242 354 aaPredicted RBP8.83□□□□□ -1
DDX41-216ENST00000513562 NAA10P41227 235 aaPredicted RBP8.83□□□□□ -1
DDX41-216ENST00000513562 YAP1P46937 504 aaKnown RBP8.83□□□□□ -1
DDX41-216ENST00000513562 CAV3P56539 151 aa8.83□□□□□ -1
DDX41-216ENST00000513562 FXYD6P3P58550 94 aa8.83□□□□□ -1
DDX41-216ENST00000513562 MXRA7P84157 204 aa8.83□□□□□ -1
DDX41-216ENST00000513562 LRRC23Q53EV4 343 aaPredicted RBP8.83□□□□□ -1
DDX41-216ENST00000513562 NANOGP8Q6NSW7 305 aa8.83□□□□□ -1
DDX41-216ENST00000513562 ERICH5Q6P6B1 374 aa8.83□□□□□ -1
DDX41-216ENST00000513562 DRAM2Q6UX65 266 aa8.83□□□□□ -1
DDX41-216ENST00000513562 DPY19L4Q7Z388 723 aa8.83□□□□□ -1
DDX41-216ENST00000513562 CROCCP2Q86T23 111 aa8.83□□□□□ -1
DDX41-216ENST00000513562 OR6V1Q8N148 313 aa8.83□□□□□ -1
DDX41-216ENST00000513562 LNX2Q8N448 690 aa8.83□□□□□ -1
DDX41-216ENST00000513562 OR5T2Q8NGG2 359 aa8.83□□□□□ -1
DDX41-216ENST00000513562 OR2AJ1Q8NGZ0 328 aa8.83□□□□□ -1
DDX41-216ENST00000513562 OR8S1Q8NH09 359 aa8.83□□□□□ -1
DDX41-216ENST00000513562 TSPEARQ8WU66 669 aa8.83□□□□□ -1
DDX41-216ENST00000513562 LZICQ8WZA0 190 aa8.83□□□□□ -1
DDX41-216ENST00000513562 SPTSSAQ969W0 71 aa8.83□□□□□ -1
DDX41-216ENST00000513562 TPD52L3Q96J77 140 aa8.83□□□□□ -1
DDX41-216ENST00000513562 MAP6Q96JE9 813 aa8.83□□□□□ -1
DDX41-216ENST00000513562 GAFA1Q96PS6 74 aa8.83□□□□□ -1
DDX41-216ENST00000513562 RAB3IPQ96QF0 476 aaPredicted RBP8.83□□□□□ -1
DDX41-216ENST00000513562 OR5M11Q96RB7 305 aa8.83□□□□□ -1
DDX41-216ENST00000513562 PRSS22Q9GZN4 317 aa8.83□□□□□ -1
DDX41-216ENST00000513562 INPP5EQ9NRR6 644 aa8.83□□□□□ -1
DDX41-216ENST00000513562 HAO2Q9NYQ3 351 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms